PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG069610.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 260aa MW: 28599.8 Da PI: 8.2725 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 26.2 | 1.4e-08 | 30 | 50 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 +C f++ G+C++Gd+C+F+H+ TRIDC5AG069610.8 30 ICYAFQK-GECSRGDSCRFSHD 50 7******.*************7 PP | |||||||
2 | zf-CCCH | 19 | 2.4e-06 | 58 | 80 | 3 | 26 |
S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26 + C f++ G+C++ ++C+F+H+ TRIDC5AG069610.8 58 RGVCYAFQK-GECSRRASCRFSHD 80 567******.*************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
NTGWGSKEDD PKWEHDRHRG PQNKGESRGI CYAFQKGECS RGDSCRFSHD EQVAVQGRGV 60 CYAFQKGECS RRASCRFSHD EQFRGMQTLI EVLGRTAMQD GSMTTIHQRA TKISLTGIKK 120 RRDQGIGMVN PQDQSCTGTE ILGRDTAIET QKIVTGTGTR NPPRDQEVTG REAMTGEEKI 180 DQTQKIGTGT GMRNPLRDQE ATGREAMTGE EKIDQRADGL GTTETLVAVT KEGVTKRKNG 240 TGNHGDKTQG MHCRCCSSLG |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG069610.8 |