PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5AG069610.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | C3H | ||||||||
Protein Properties | Length: 247aa MW: 29294.8 Da PI: 9.9922 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 26.3 | 1.3e-08 | 33 | 53 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 +C f++ G+C++Gd+C+F+H+ TRIDC5AG069610.7 33 ICYAFQK-GECSRGDSCRFSHD 53 7******.*************7 PP | |||||||
2 | zf-CCCH | 19.1 | 2.3e-06 | 61 | 83 | 3 | 26 |
S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26 + C f++ G+C++ ++C+F+H+ TRIDC5AG069610.7 61 RGVCYAFQK-GECSRRASCRFSHD 83 567******.*************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 247 aa Download sequence |
RNANTGWGSK EDDPKWEHDR HRGPQNKGES RGICYAFQKG ECSRGDSCRF SHDEQVAVQG 60 RGVCYAFQKG ECSRRASCRF SHDEQRNANT DRGSWEDSNA RRQHDHDPPK SHKNFPDRNK 120 EETRSGDRDG QSSRSELHRD RDSRSRHGDR DTKDSDRNRH EKSPERSRGD RQRGDDRGRE 180 DRSDTKDRDR NRHEKSPERS RGDRQRGDDR GREDRSESRR SRHDRDSGGR HERRGDEEEE 240 RYRKSRR |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5AG069610.7 |