PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG069610.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 262aa    MW: 31031.7 Da    PI: 9.1459
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG069610.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.21.4e-084868526
                      --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                      +C  f++ G+C++Gd+C+F+H+
  TRIDC5AG069610.5 48 ICYAFQK-GECSRGDSCRFSHD 68
                      7******.*************7 PP
2zf-CCCH192.5e-067698326
                      S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                      +  C  f++ G+C++ ++C+F+H+
  TRIDC5AG069610.5 76 RGVCYAFQK-GECSRRASCRFSHD 98
                      567******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
ECNRGDACKY SHDEQRNANT GWGSKEDDPK WEHDRHRGPQ NKGESRGICY AFQKGECSRG  60
DSCRFSHDEQ VAVQGRGVCY AFQKGECSRR ASCRFSHDEQ RNANTDRGSW EDSNARRQHD  120
HDPPKSHKNF PDRNKEETRS GDRDGQSSRS ELHRDRDSRS RHGDRDTKDS DRNRHEKSPE  180
RSRGDRQRGD DRGREDRSDT KDRDRNRHEK SPERSRGDRQ RGDDRGREDR SESRRSRHDR  240
DSGGRHERRG DEEEERYRKS RR