PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG068300.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 138aa MW: 14785.9 Da PI: 11.1387

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG068300.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00018	44	66	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++sF++ L H +H TRIDC5AG068300.1 44 FVCKTCDRSFPTFQALGGHRTSH 66 89**********99998888877 PP
2	zf-C2H2	15.7	4.2e-05	94	116	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+ F L H+r+H TRIDC5AG068300.1 94 HQCHVCGQAFEMGQALGGHMRRH 116 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence
MTKHQRAPAD RLVSLSLSLS LSLGAIADRN TKRTRRTAAA GGEFVCKTCD RSFPTFQALG 60 GHRTSHLRGR HGLALALAGT GPEPRKATDQ KQGHQCHVCG QAFEMGQALG GHMRRHREQE 120 AAAAAVAQAP PVLLELFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	6e-17	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG068300.1