PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG067730.14
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 337aa    MW: 36875 Da    PI: 8.0672
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG067730.14genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552.1e-17112161155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  TRIDC5AG067730.14 112 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 161
                        78*******************......55************************998 PP
2AP242.12.1e-13204254155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                        s+y+GV+ +k  grW+A+       g    +k+++lg f+++ eAa+a+++a+ +++g
  TRIDC5AG067730.14 204 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 254
                        89********.7******...5...334336**********99**********99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
ESPADSGTSS SSVLNSADAG GGGFRFGLLG SPDDDDCSGE PAPVGPGFVT RQLFPASPPG  60
HAGAPGVTMG QQAPAPAPMA PVWQPRRAEE LLVAQRMAPA KKTRRGPRSR SSQYRGVTFY  120
RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GLEADINFNL SDYEEDLKQM  180
RNWTKEEFVH ILRRQSTGFA RGSSKYRGVT LHKCGRWEAR MGQLLGKKYI YLGLFDSEVE  240
AARAYDRAAI RFNGREAVTN FESSSYNGDA PPDAENEGTT TIAIVDADAL DLDLRMSQPT  300
AHDPKRDNII AGLQLTFDSP ESSTTMVSSQ VKKQNYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.12e-90AP2 family protein