PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5AG063570.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 181aa MW: 19672 Da PI: 9.7042 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 58.1 | 2.4e-18 | 44 | 100 | 26 | 85 |
trihelix 26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 + +p+W++v++++r++g+er+++qC+++w+nl++++kkike+e+ + + p f + TRIDC5AG063570.3 44 ALEPKWAAVAEYCRRHGVERGAVQCRKRWSNLAGDWKKIKEWERAAAGA---REPSFWAM 100 5589****************************************86333...34667666 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 181 aa Download sequence |
PRRRPTRRCA PRGCPAGRGR RYWCSSRLAA AAAAGATGEG AAAALEPKWA AVAEYCRRHG 60 VERGAVQCRK RWSNLAGDWK KIKEWERAAA GAREPSFWAM RNDARRERRL PGFFDREVYG 120 ILEGRGRGVV AGSSSGGGAA VEEVGVVRME EDDDEETGEE EEERGKGKER GGGPLLGGGR 180 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G33550.1 | 2e-35 | Trihelix family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5AG063570.3 |