PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG060800.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 219aa    MW: 24564.8 Da    PI: 7.4747
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG060800.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH57.23.1e-183581455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       hn+ ErrRRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC5AG060800.7 35 VHNQSERRRRDRINEKMRSLQELIPHC-----NKADKASILDEAIEYLKSLQ 81
                      6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
DDSDSRSEDV ECEATEETKS SRQHGSKRRS RAAEVHNQSE RRRRDRINEK MRSLQELIPH  60
CNKADKASIL DEAIEYLKSL QMQVQIMWMT TGMAPMMFPG SHQFMPPMAV GMNSACMPAA  120
QGLNQMARVP YMNHSLSNHI PMSPSPAMNP MYIANQMQNI QLREASNHFL HLDGGQATAP  180
QVCSRTICLY TTSSTEKPDT GSAGLYCCAN FWARTTTCT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12744KRRSRAAEVHNQSERRRR
24045ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.23e-36bHLH family protein