PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG059790.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 1183aa MW: 132060 Da PI: 6.7388

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG059790.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.7	6.4e-07	112	161	2	51
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkteke 51 fY Y++++GF+ r+ ++++s +g +++++f C + ++ ++ +k++++ TRIDC5AG059790.8 112 FYYGYGERAGFKARTGSNRRSAGTGGMIMQRFLCCRGNYSYRKGNKAKDS 161 9*********************************9988777776663333 PP
2	FAR1	75.5	1.1e-23	436	522	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ + +r +vCskeg+r ++ ++ + +++rae rtgC+a+++v+ +++gk++vt+ + +HnH+l TRIDC5AG059790.8 436 EFYVSYAGTAGFNVRKGCSEKT-ANNVTRSRSYVCSKEGFRPKSVTA--EPKKQRAEIRTGCEAHMTVRITTSGKYVVTEYVADHNHDLE 522 6***************9999.66669***********9988..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 1183 aa Download sequence
PASSSDPPPP AEPGEPLSRG YLSLRQAGPA SEEEASPAPA GPPDERCRAM MEVVRKDGGV 60 GGDEGKWKVS KLVVEHNHVL EAAATGEAAP SAAAAAPELG MEFDSVQDAK GFYYGYGERA 120 GFKARTGSNR RSAGTGGMIM QRFLCCRGNY SYRKGNKAKD SAAPKEVEEG AAGEGEGEGK 180 VGAHKKRGRK PGKKSTPVIK VKNSVEKGVA TAGTGNGQAV PSTENLGRGG DKKDAVEKDV 240 ESVVELEEEH VEVEDAAQDG AHDLGDGDDA NSDAHEGEME KEVEVKEKRG RGRPRKAVTE 300 DNALQACVST DLGVMASQCA VDERKKILNK YLSKRQSRPA SGRPAKIVSC QALAERRKRG 360 DGGRFLSSDG PLVTLLPSER RSKRLEKQNL KNEKKPESKE DEIVEAEQDP ETEVVAGPGG 420 EPKVGMVFLN EDKAYEFYVS YAGTAGFNVR KGCSEKTANN VTRSRSYVCS KEGFRPKSVT 480 AEPKKQRAEI RTGCEAHMTV RITTSGKYVV TEYVADHNHD LEAPLVDIQI LRSQKLLAKL 540 QQPPDPPKVV LIPNDYKNYV RTRHTKDMQS GDAQAISEYL QRMKGKNPSF FCSIQVDEDD 600 QFRNVFWADV KSVMDFNYFG DVVCVDTRYS TSDYCRPLLL FIGVNHHKEP TIFGTAFIYD 660 ESVESFKWLF ETFKSAMSGK QPRTVLTDRS TAISDAVASA WPGTAHRFSL LHLYQNATKV 720 LSDTFQGSET FAHDFSRSLY DYEEEGDFLS SWEILLAKYN LKDNKWLSKL YEDRERWALP 780 YGRDIFCADI AATLRSDNMD AILTGVLKTE IDLPYFFNRY DKFLEEKRLA EQQADYLGVQ 840 MTQRVPPLRL LWQAANTYTP ALFEMFRLEF ELVLSCMVYC CGEIGPISEY EVTVKNRPQV 900 HFVRFDSSEY MVVCSCKKFE FVGLPCCHVL KVLEIKNIKE LPPQYILKRW RKDAQSESPK 960 ENFGFAAVDE DPKFTVSKRH NSLYRTLYKV AAKAAENIEG QRFMESQYDQ LLEQVELLLQ 1020 AKLHDKPSLS TIMRSQQPNL PQNDTSNSEP RRASSKKNKN VENRRQQQSP LESSKKKKGR 1080 QGLVEPEEAE LPLRVLAPTI SNDIPNHMST PTNQFLAPNH IMQAPYVTQQ FGLNSLQGFS 1140 GMTPFGQAPP PDIQSLQFLS SNPQLGHQTT DQGQYTIPVW DFL

Sequence ? help Back to Top

Protein Sequence Length: 1183 aa Download sequence

PASSSDPPPP AEPGEPLSRG YLSLRQAGPA SEEEASPAPA GPPDERCRAM MEVVRKDGGV  60
GGDEGKWKVS KLVVEHNHVL EAAATGEAAP SAAAAAPELG MEFDSVQDAK GFYYGYGERA  120
GFKARTGSNR RSAGTGGMIM QRFLCCRGNY SYRKGNKAKD SAAPKEVEEG AAGEGEGEGK  180
VGAHKKRGRK PGKKSTPVIK VKNSVEKGVA TAGTGNGQAV PSTENLGRGG DKKDAVEKDV  240
ESVVELEEEH VEVEDAAQDG AHDLGDGDDA NSDAHEGEME KEVEVKEKRG RGRPRKAVTE  300
DNALQACVST DLGVMASQCA VDERKKILNK YLSKRQSRPA SGRPAKIVSC QALAERRKRG  360
DGGRFLSSDG PLVTLLPSER RSKRLEKQNL KNEKKPESKE DEIVEAEQDP ETEVVAGPGG  420
EPKVGMVFLN EDKAYEFYVS YAGTAGFNVR KGCSEKTANN VTRSRSYVCS KEGFRPKSVT  480
AEPKKQRAEI RTGCEAHMTV RITTSGKYVV TEYVADHNHD LEAPLVDIQI LRSQKLLAKL  540
QQPPDPPKVV LIPNDYKNYV RTRHTKDMQS GDAQAISEYL QRMKGKNPSF FCSIQVDEDD  600
QFRNVFWADV KSVMDFNYFG DVVCVDTRYS TSDYCRPLLL FIGVNHHKEP TIFGTAFIYD  660
ESVESFKWLF ETFKSAMSGK QPRTVLTDRS TAISDAVASA WPGTAHRFSL LHLYQNATKV  720
LSDTFQGSET FAHDFSRSLY DYEEEGDFLS SWEILLAKYN LKDNKWLSKL YEDRERWALP  780
YGRDIFCADI AATLRSDNMD AILTGVLKTE IDLPYFFNRY DKFLEEKRLA EQQADYLGVQ  840
MTQRVPPLRL LWQAANTYTP ALFEMFRLEF ELVLSCMVYC CGEIGPISEY EVTVKNRPQV  900
HFVRFDSSEY MVVCSCKKFE FVGLPCCHVL KVLEIKNIKE LPPQYILKRW RKDAQSESPK  960
ENFGFAAVDE DPKFTVSKRH NSLYRTLYKV AAKAAENIEG QRFMESQYDQ LLEQVELLLQ  1020
AKLHDKPSLS TIMRSQQPNL PQNDTSNSEP RRASSKKNKN VENRRQQQSP LESSKKKKGR  1080
QGLVEPEEAE LPLRVLAPTI SNDIPNHMST PTNQFLAPNH IMQAPYVTQQ FGLNSLQGFS  1140
GMTPFGQAPP PDIQSLQFLS SNPQLGHQTT DQGQYTIPVW DFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	288	296	KRGRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-108	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG059790.8