PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG059790.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 891aa MW: 101083 Da PI: 7.1786

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG059790.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76	7.7e-24	241	327	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA ++GF+vrk s+k+ n+ + +r +vCskeg+r ++ ++ + +++rae rtgC+a+++v+ +++gk++vt+ + +HnH+l TRIDC5AG059790.3 241 EFYVSYAGTAGFNVRKGCSEKT-ANNVTRSRSYVCSKEGFRPKSVTA--EPKKQRAEIRTGCEAHMTVRITTSGKYVVTEYVADHNHDLE 327 6***************9999.66669***********9988..9999********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 891 aa Download sequence
GKKSTPVIKV KNSVEKGVAT AGTGNGQAVP STENLGRGGD KKDAVEKDVE SVVELEEEHV 60 EVEDAAQDGA HDLGDGDDAN SDAHEGEMEK EVEVKEKRGR GRPRKAVTED NALQACVSTD 120 LGVMASQCAV DERKKILNKY LSKRQSRPAS GRPAKIVSCQ ALAERRKRGD GGRFLSSDGP 180 LPSERRSKRL EKQNLKNEKK PESKEDEIVE AEQDPETEVV AGPGGEPKVG MVFLNEDKAY 240 EFYVSYAGTA GFNVRKGCSE KTANNVTRSR SYVCSKEGFR PKSVTAEPKK QRAEIRTGCE 300 AHMTVRITTS GKYVVTEYVA DHNHDLEAPL VDIQILRSQK LLAKLQQPPD PPKVVLIPND 360 YKNYVRTRHT KDMQSGDAQA ISEYLQRMKG KNPSFFCSIQ VDEDDQFRNV FWADVKSVMD 420 FNYFGDVVCV DTRYSTSDYC RPLLLFIGVN HHKEPTIFGT AFIYDESVES FKWLFETFKS 480 AMSGKQPRTV LTDRSTAISD AVASAWPGTA HRFSLLHLYQ NATKVLSDTF QGSETFAHDF 540 SRSLYDYEEE GDFLSSWEIL LAKYNLKDNK WLSKLYEDRE RWALPYGRDI FCADIAATLR 600 SDNMDAILTG VLKTEIDLPY FFNRYDKFLE EKRLAEQQAD YLGVQMTQRV PPLRLLWQAA 660 NTYTPALFEM FRLEFELVLS CMVYCCGEIG PISEYEVTVK NRPQVHFVRF DSSEYMVVCS 720 CKKFEFVGLP CCHVLKVLEI KNIKELPPQY ILKRWRKDAQ SESPKENFGF AAVDEDPKFT 780 VSKRHNSLYR TLYKVAAKAA ENIEGQRFME SQYDQLLEQV ELLLQAKLHD KPSLSTIMRS 840 QQPNLPQNDT SNSEPRRASS KKNKNVENRR QQQSPLESSK KKKGRQGMFI T

Sequence ? help Back to Top

Protein Sequence Length: 891 aa Download sequence

GKKSTPVIKV KNSVEKGVAT AGTGNGQAVP STENLGRGGD KKDAVEKDVE SVVELEEEHV  60
EVEDAAQDGA HDLGDGDDAN SDAHEGEMEK EVEVKEKRGR GRPRKAVTED NALQACVSTD  120
LGVMASQCAV DERKKILNKY LSKRQSRPAS GRPAKIVSCQ ALAERRKRGD GGRFLSSDGP  180
LPSERRSKRL EKQNLKNEKK PESKEDEIVE AEQDPETEVV AGPGGEPKVG MVFLNEDKAY  240
EFYVSYAGTA GFNVRKGCSE KTANNVTRSR SYVCSKEGFR PKSVTAEPKK QRAEIRTGCE  300
AHMTVRITTS GKYVVTEYVA DHNHDLEAPL VDIQILRSQK LLAKLQQPPD PPKVVLIPND  360
YKNYVRTRHT KDMQSGDAQA ISEYLQRMKG KNPSFFCSIQ VDEDDQFRNV FWADVKSVMD  420
FNYFGDVVCV DTRYSTSDYC RPLLLFIGVN HHKEPTIFGT AFIYDESVES FKWLFETFKS  480
AMSGKQPRTV LTDRSTAISD AVASAWPGTA HRFSLLHLYQ NATKVLSDTF QGSETFAHDF  540
SRSLYDYEEE GDFLSSWEIL LAKYNLKDNK WLSKLYEDRE RWALPYGRDI FCADIAATLR  600
SDNMDAILTG VLKTEIDLPY FFNRYDKFLE EKRLAEQQAD YLGVQMTQRV PPLRLLWQAA  660
NTYTPALFEM FRLEFELVLS CMVYCCGEIG PISEYEVTVK NRPQVHFVRF DSSEYMVVCS  720
CKKFEFVGLP CCHVLKVLEI KNIKELPPQY ILKRWRKDAQ SESPKENFGF AAVDEDPKFT  780
VSKRHNSLYR TLYKVAAKAA ENIEGQRFME SQYDQLLEQV ELLLQAKLHD KPSLSTIMRS  840
QQPNLPQNDT SNSEPRRASS KKNKNVENRR QQQSPLESSK KKKGRQGMFI T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	105	KRGRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-111	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG059790.3