PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG058920.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 132aa MW: 15016.7 Da PI: 8.7427 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.2 | 2.3e-14 | 65 | 116 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I +s +k +lg+f + +Aa+a++ a+ k++g TRIDC5AG058920.6 65 SVYRGVTRHHQQGRWQARIGRVSG---NKDLYLGTFSAEADAAEAYDVAAIKFRG 116 78****************999754...5**********99************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
GGYDMEEKAA RAYDLAALKY WGASTHINFP VEDYQEELEV MKNMTRQEYV AHLRRKSSGF 60 SRGASVYRGV TRHHQQGRWQ ARIGRVSGNK DLYLGTFSAE ADAAEAYDVA AIKFRGLNAV 120 TNFDINRYDV DK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 6e-72 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG058920.6 |