PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG058920.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 131aa    MW: 14721.5 Da    PI: 9.161
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG058920.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2232e-0712402855
               AP2 28 r.krfslgkfgtaeeAakaaiaarkkleg 55
                      +  +++lg ++ +e+Aa+a++ a++k++g
  TRIDC5AG058920.5 12 StSSVYLGGYDMEEKAARAYDLAALKYWG 40
                      3489***********************98 PP
2AP2301.3e-0983117138
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38 
                       s y+GV++++++grW A+I  +s    +k  +lg+f t
  TRIDC5AG058920.5  83 SVYRGVTRHHQQGRWQARIGRVSG---NKDLYLGTFST 117
                       78****************999754...4********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
FAGPFAWGSI VSTSSVYLGG YDMEEKAARA YDLAALKYWG ASTHINFPVE DYQEELEVMK  60
NMTRQEYVAH LRRKSSGFSR GASVYRGVTR HHQQGRWQAR IGRVSGNKDL YLGTFSTCPA  120
QTSSCSPCCR H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.13e-62AP2 family protein