PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG058920.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 472aa    MW: 50389.1 Da    PI: 9.8128
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG058920.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.43e-12169225155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV++++++gr++A+++d  + ++  ++ k  + g ++ +e+Aa+a++ a++k++g
  TRIDC5AG058920.4 169 SKYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDMEEKAARAYDLAALKYWG 225
                       89*******************433.44555535555.77******************98 PP
2AP242.22.1e-13268319155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV++++++grW A+I  +s    +k  +lg+f  + +Aa+a++ a+ k++g
  TRIDC5AG058920.4 268 SVYRGVTRHHQQGRWQARIGRVSG---NKDLYLGTFSAEADAAEAYDVAAIKFRG 319
                       78****************999754...5**********99************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MALSLDNSGY YYGGQGHGHG DAGGGQHQLP YAMMPGSGGH HMYYDAHAAL LDEQAAATSA  60
AMEAAGWMAR AGDVYDVDAG NGEDAIVATG HDNPGGYVHP LTLSMSSGSQ SSCVTMQQAA  120
AHAHAYVGAG GECVGQATAA SKKRGAGAGQ NKQPVVHRKC IDTFGQRTSK YRGVTRHRWT  180
GRYEAHLWDN SCRKEGQTRK GRQGGYDMEE KAARAYDLAA LKYWGASTHI NFPVEDYQEE  240
LEVMKNMTRQ EYVAHLRRKS SGFSRGASVY RGVTRHHQQG RWQARIGRVS GNKDLYLGTF  300
SAEADAAEAY DVAAIKFRGL NAVTNFDINR YDVDKIMESS TLLPGDQVRR RKDGPDESAA  360
VVASAAAALV QAGSARVLLP AARRGVPGRR RGWCSGAGQP HVGRVVPGHE PEQLPGAEPG  420
PGRRPGHAVR PARGAEAGEL AAHGHLGLIA GAGQARRVRG AHASVRRVGR RL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-108AP2 family protein