PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG058920.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 521aa MW: 55534.1 Da PI: 6.9415

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG058920.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.2	3.4e-12	245	301	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e+Aa+a++ a++k++g TRIDC5AG058920.2 245 SKYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDMEEKAARAYDLAALKYWG 301 89*****************433.44555535555.77****************98 PP
2	AP2	42	2.4e-13	344	395	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I +s +k +lg+f + +Aa+a++ a+ k++g TRIDC5AG058920.2 344 SVYRGVTRHHQQGRWQARIGRVSG---NKDLYLGTFSAEADAAEAYDVAAIKFRG 395 78**************999754...5******99**********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
YHPDAVASSP MSFYFGGSDN VGAASGGYYS GISALPLRSD GSLCLADALR RSEQKHHGAE 60 VSAPPKLEDF LGASPAMALS LDNSGYYYGG QGHGHGDAGG GQHQLPYAMM PGSGGHHMYY 120 DAHAALLDEQ AAATSAAMEA AGWMARAGDV YDVDAGNGED AIVATGHDNP GGYVHPLTLS 180 MSSGSQSSCV TMQQAAAHAH AYVGAGGECV GQATAASKKR GAGAGQNKQP VVHRKCIDTF 240 GQRTSKYRGV TRHRWTGRYE AHLWDNSCRK EGQTRKGRQG GYDMEEKAAR AYDLAALKYW 300 GASTHINFPV EDYQEELEVM KNMTRQEYVA HLRRKSSGFS RGASVYRGVT RHHQQGRWQA 360 RIGRVSGNKD LYLGTFSAEA DAAEAYDVAA IKFRGLNAVT NFDINRYDVD KIMESSTLLP 420 GDQVRRRKDG PDESAAVVAS AAAALVQAGS AADYWRQPAA VTTEEHSRHH LDLLSSESFS 480 LLRGVVSLDG DAAGAQGQGN RMSGASSLAT SLSNSREQSP D

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

YHPDAVASSP MSFYFGGSDN VGAASGGYYS GISALPLRSD GSLCLADALR RSEQKHHGAE  60
VSAPPKLEDF LGASPAMALS LDNSGYYYGG QGHGHGDAGG GQHQLPYAMM PGSGGHHMYY  120
DAHAALLDEQ AAATSAAMEA AGWMARAGDV YDVDAGNGED AIVATGHDNP GGYVHPLTLS  180
MSSGSQSSCV TMQQAAAHAH AYVGAGGECV GQATAASKKR GAGAGQNKQP VVHRKCIDTF  240
GQRTSKYRGV TRHRWTGRYE AHLWDNSCRK EGQTRKGRQG GYDMEEKAAR AYDLAALKYW  300
GASTHINFPV EDYQEELEVM KNMTRQEYVA HLRRKSSGFS RGASVYRGVT RHHQQGRWQA  360
RIGRVSGNKD LYLGTFSAEA DAAEAYDVAA IKFRGLNAVT NFDINRYDVD KIMESSTLLP  420
GDQVRRRKDG PDESAAVVAS AAAALVQAGS AADYWRQPAA VTTEEHSRHH LDLLSSESFS  480
LLRGVVSLDG DAAGAQGQGN RMSGASSLAT SLSNSREQSP D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-109	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG058920.2