PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG058920.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 629aa MW: 66175.2 Da PI: 7.0845

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG058920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.5	1e-15	299	358	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g TRIDC5AG058920.1 299 SKYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 358 89*****************655454478446***********************98 PP
2	AP2	41.6	3e-13	401	452	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I +s +k +lg+f + +Aa+a++ a+ k++g TRIDC5AG058920.1 401 SVYRGVTRHHQQGRWQARIGRVSG---NKDLYLGTFSAEADAAEAYDVAAIKFRG 452 78**************999754...5******99**********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MTNGGHSMSG ASIASGAGGW LGFSLSPHVA MEAAAGSGIV DVAGHHHAQH GGVYYHPDAV 60 ASSPMSFYFG GSDNVGAASG GYYSGISALP LRSDGSLCLA DALRRSEQKH HGAEVSAPPK 120 LEDFLGASPA MALSLDNSGY YYGGQGHGHG DAGGGQHQLP YAMMPGSGGH HMYYDAHAAL 180 LDEQAAATSA AMEAAGWMAR AGDVYDVDAG NGEDAIVATG HDNPGGYVHP LTLSMSSGSQ 240 SSCVTMQQAA AHAHAYVGAG GECVGQATAA SKKRGAGAGQ NKQPVVHRKC IDTFGQRTSK 300 YRGVTRHRWT GRYEAHLWDN SCRKEGQTRK GRQVYLGGYD MEEKAARAYD LAALKYWGAS 360 THINFPVEDY QEELEVMKNM TRQEYVAHLR RKSSGFSRGA SVYRGVTRHH QQGRWQARIG 420 RVSGNKDLYL GTFSAEADAA EAYDVAAIKF RGLNAVTNFD INRYDVDKIM ESSTLLPGDQ 480 VRRRKDGPDE SAAVVASAAA ALVQAGSAAD YWRQPAAVTT EEHSRHHLDL LSSESFSLLR 540 GVVSLDGDAA GAQGQGNRMS GASSLATSLS NSREQSPDQG GGLAMLFARP AAPKLASSLP 600 MGTWVSSPAP ARPGVSVAHM PVFAAWADA

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MTNGGHSMSG ASIASGAGGW LGFSLSPHVA MEAAAGSGIV DVAGHHHAQH GGVYYHPDAV  60
ASSPMSFYFG GSDNVGAASG GYYSGISALP LRSDGSLCLA DALRRSEQKH HGAEVSAPPK  120
LEDFLGASPA MALSLDNSGY YYGGQGHGHG DAGGGQHQLP YAMMPGSGGH HMYYDAHAAL  180
LDEQAAATSA AMEAAGWMAR AGDVYDVDAG NGEDAIVATG HDNPGGYVHP LTLSMSSGSQ  240
SSCVTMQQAA AHAHAYVGAG GECVGQATAA SKKRGAGAGQ NKQPVVHRKC IDTFGQRTSK  300
YRGVTRHRWT GRYEAHLWDN SCRKEGQTRK GRQVYLGGYD MEEKAARAYD LAALKYWGAS  360
THINFPVEDY QEELEVMKNM TRQEYVAHLR RKSSGFSRGA SVYRGVTRHH QQGRWQARIG  420
RVSGNKDLYL GTFSAEADAA EAYDVAAIKF RGLNAVTNFD INRYDVDKIM ESSTLLPGDQ  480
VRRRKDGPDE SAAVVASAAA ALVQAGSAAD YWRQPAAVTT EEHSRHHLDL LSSESFSLLR  540
GVVSLDGDAA GAQGQGNRMS GASSLATSLS NSREQSPDQG GGLAMLFARP AAPKLASSLP  600
MGTWVSSPAP ARPGVSVAHM PVFAAWADA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-113	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG058920.1