PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG057020.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 238aa MW: 27466.6 Da PI: 9.0121 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.8 | 2.5e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+ rqvtf+kRrng+lKKA+ELS LCdaeva+++fs+ g+ly +ss TRIDC5AG057020.2 10 RIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALVLFSHAGRLYQFSS 59 9***********************************************96 PP | |||||||
2 | K-box | 87.8 | 2.1e-29 | 84 | 173 | 10 | 99 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ ++++ + e+ Lk+++e Lqr+qR+llGedL +Ls eL+qLe q+ k l++iRs+K+++ll+++ +l++ke+ lq++n++L++kl TRIDC5AG057020.2 84 TTDEMQNNYLEYMELKARVEVLQRSQRNLLGEDLAPLSTIELEQLEGQVGKTLRQIRSRKTQVLLDEMCDLKRKEQILQDANMTLKRKLG 173 567899*********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MGRGKVVLQR IENKISRQVT FAKRRNGLLK KAYELSLLCD AEVALVLFSH AGRLYQFSSS 60 SNMLKTLEKY QRYIFASQDA AVPTTDEMQN NYLEYMELKA RVEVLQRSQR NLLGEDLAPL 120 STIELEQLEG QVGKTLRQIR SRKTQVLLDE MCDLKRKEQI LQDANMTLKR KLGEIELEAT 180 PDPPQQPQQQ QMWQGDRGVP PHTPPQPEHF FQALERYPSL QPVFRGMDVN QPPPAWMA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 6e-72 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG057020.2 |