PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG056870.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 568aa MW: 63724.1 Da PI: 7.6832

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG056870.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.8	4.4e-12	109	149	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W ++E+ ll+++++++G g+W+ +a+++g +++ qc++++ TRIDC5AG056870.5 109 WNADEEILLLEGIEMYGLGNWAEVAEHVG-TKSKAQCIEHYT 149 ***************************.********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MGRSRGVPNS GDDDTNHRSK RRRVASTGDA SDSLSAACGG AGDGKKALYH CNYCNKDLSG 60 KIRFKCSKCP DFDLCVECFS VGAEVTPHRS NHPYRVMDNL SFPLICPDWN ADEEILLLEG 120 IEMYGLGNWA EVAEHVGTKS KAQCIEHYTT AYMNSPCYPL PDMSHVNGKN RKELLAMAKV 180 QGESKKGIPL LSGDLTPKAE SPFSPSRIKM EDALGEGPAS RSPSHIPGGA NKKASTVGHF 240 KDSANLSKVE DGHMDRSIGV KKPRYSADEG PSLTELSGYN AKRHEFDPEY DNDAEQALAE 300 MEFKETDSET DRELKLRVLR IYLSRLDERK RRKEFILERN LLYPNPLEKD LTNEDKEVYH 360 RYKVFMRFLS KEEHEALVRS VIEERKIRRR IQELQECRSA GCRTLAEAKI HIEQKRRKEY 420 EANALKAKES GQLISNSKSG HKTNRPVKLE TDGSLDLKKG SGILDAGGRD SPKTTGPTSA 480 KQWDDWDIVG LPGAELLSAS EKLLCCQNRL LPSHYLRMQE VLMQEMFKGN VVKKEDAHVL 540 FKVDPAKVDT VYDMVTKKLG NNEEAPMV

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MGRSRGVPNS GDDDTNHRSK RRRVASTGDA SDSLSAACGG AGDGKKALYH CNYCNKDLSG  60
KIRFKCSKCP DFDLCVECFS VGAEVTPHRS NHPYRVMDNL SFPLICPDWN ADEEILLLEG  120
IEMYGLGNWA EVAEHVGTKS KAQCIEHYTT AYMNSPCYPL PDMSHVNGKN RKELLAMAKV  180
QGESKKGIPL LSGDLTPKAE SPFSPSRIKM EDALGEGPAS RSPSHIPGGA NKKASTVGHF  240
KDSANLSKVE DGHMDRSIGV KKPRYSADEG PSLTELSGYN AKRHEFDPEY DNDAEQALAE  300
MEFKETDSET DRELKLRVLR IYLSRLDERK RRKEFILERN LLYPNPLEKD LTNEDKEVYH  360
RYKVFMRFLS KEEHEALVRS VIEERKIRRR IQELQECRSA GCRTLAEAKI HIEQKRRKEY  420
EANALKAKES GQLISNSKSG HKTNRPVKLE TDGSLDLKKG SGILDAGGRD SPKTTGPTSA  480
KQWDDWDIVG LPGAELLSAS EKLLCCQNRL LPSHYLRMQE VLMQEMFKGN VVKKEDAHVL  540
FKVDPAKVDT VYDMVTKKLG NNEEAPMV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	24	KRRRV
2	329	334	RKRRKE

Link Out ? help Back to Top
Ensembl	TRIDC5AG056870.5