PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG056870.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 488aa MW: 55076.6 Da PI: 6.7069

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG056870.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.1	3.6e-12	29	69	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W ++E+ ll+++++++G g+W+ +a+++g +++ qc++++ TRIDC5AG056870.3 29 WNADEEILLLEGIEMYGLGNWAEVAEHVG-TKSKAQCIEHYT 69 ***************************.********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MLAVFVASCN LTEILQQDNL SFPLICPDWN ADEEILLLEG IEMYGLGNWA EVAEHVGTKS 60 KAQCIEHYTT AYMNSPCYPL PDMSHVNGKN RKELLAMAKV QGESKKGIPL LSGDLTPKAE 120 SPFSPSRIKM EDALGEGPAS RSPSHIPGGA NKKASTVGHF KDSANLSKVE DGHMDRSIGV 180 KKPRYSADEG PSLTELSGYN AKRHEFDPEY DNDAEQALAE MEFKETDSET DRELKLRVLR 240 IYLSRLDERK RRKEFILERN LLYPNPLEKD LTNEDKEVYH RYKVFMRFLS KEEHEALVRS 300 VIEERKIRRR IQELQECRSA GCRTLAEAKI HIEQKRRKEY EANALKAKES GQLISNSKSG 360 HKTNRPVKLE TDGSLDLKKG SGILDAGGRD SPKTTGPTSA KQWDDWDIVG LPGAELLSAS 420 EKLLCCQNRL LPSHYLRMQE VLMQEMFKGN VVKKEDAHVL FKVDPAKVDT VYDMVTKKLG 480 NNEEAPMV

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MLAVFVASCN LTEILQQDNL SFPLICPDWN ADEEILLLEG IEMYGLGNWA EVAEHVGTKS  60
KAQCIEHYTT AYMNSPCYPL PDMSHVNGKN RKELLAMAKV QGESKKGIPL LSGDLTPKAE  120
SPFSPSRIKM EDALGEGPAS RSPSHIPGGA NKKASTVGHF KDSANLSKVE DGHMDRSIGV  180
KKPRYSADEG PSLTELSGYN AKRHEFDPEY DNDAEQALAE MEFKETDSET DRELKLRVLR  240
IYLSRLDERK RRKEFILERN LLYPNPLEKD LTNEDKEVYH RYKVFMRFLS KEEHEALVRS  300
VIEERKIRRR IQELQECRSA GCRTLAEAKI HIEQKRRKEY EANALKAKES GQLISNSKSG  360
HKTNRPVKLE TDGSLDLKKG SGILDAGGRD SPKTTGPTSA KQWDDWDIVG LPGAELLSAS  420
EKLLCCQNRL LPSHYLRMQE VLMQEMFKGN VVKKEDAHVL FKVDPAKVDT VYDMVTKKLG  480
NNEEAPMV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	249	254	RKRRKE

Link Out ? help Back to Top
Ensembl	TRIDC5AG056870.3