PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG056600.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 685aa    MW: 78236.5 Da    PI: 6.5828
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG056600.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.29.7e-16156242297
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                       f +l  s+++ ++ +++p  f  ++ ++  ++ +++l+ +sg++W+v+l   k sg+ ++++GWkeF ++n++  g  +vF++dg+s+f   v
  TRIDC5AG056600.2 156 FRTL-ISYSFMEH-MTIPVGFH-KYLED--CTGMVSLRGPSGNKWSVEL--AKISGELLFARGWKEFLSDNRIGYGYLLVFRYDGQSQF--SV 239
                       5555.35566666.89999997.66544..6779***************..*********************************99999..77 PP

                       EEE CS
                B3  95 kvf 97 
                       ++f
  TRIDC5AG056600.2 240 TIF 242
                       766 PP
2B346.56.4e-15573664293
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       +k+++++dv +s  +++p kf++++  +k es+++tl d++ + W+v + y  + + r  +++GW   + +n+L+  D++vF+l ++  + +l
  TRIDC5AG056600.2 573 IKAMKHNDVYASYFMIIPDKFVKTFL-PK-ESRKMTLWDPQAKPWKVWYEYtGGERPRAAFSAGWGALAMENNLEKWDVCVFELLDQeYNIKL 663
                       58999*****************8884.43.6789***************99544444599***********************8753244444 PP

                       E CS
                B3  93 v 93 
                       +
  TRIDC5AG056600.2 664 H 664
                       4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 685 aa     Download sequence    
MVRHKKQYNT MGVVDNMQNV KVKEEEDENI NMKGKRKQNK AEGGKKAEEK QNSSKRKMDK  60
NKEEKEKRMR VVDKNDDEKE REDRSKRKEN EKKVKSHIER KEDNDNKKEE QGQREIEKDK  120
VEEEKEINKQ KGRKEEEDSK EKDKDQNDKT NCPHFFRTLI SYSFMEHMTI PVGFHKYLED  180
CTGMVSLRGP SGNKWSVELA KISGELLFAR GWKEFLSDNR IGYGYLLVFR YDGQSQFSVT  240
IFLPSSCEDP YAYLARPQCK DVDWHQCTNV DGVAPQEEDT HSGTSADGAP QNEASEEEDA  300
SEDEDAEEVE DALSETPGNE EDSECRMCND DALEPVQQQQ EDLRKTDDGF LIGKRARFRK  360
VDDIMAEVDR SKKSKPAERK NSEGPSSDPT SGGGASSDSL AESEHRPPKK SKAGEIRSPF  420
GDSPSKAATS SDNFAELDSH PSKESKAEGK SSAPPLIVYT GSSSSASKSV PLKKASKETI  480
SNDNLAVHTG VFAPESVCTD LTMWHNSFGK RLSKQNQFPM FNKSNGENQP GRVLIKVMRR  540
LGLMSQRRPV TQREKEYAME RAHRFKSERP FAIKAMKHND VYASYFMIIP DKFVKTFLPK  600
ESRKMTLWDP QAKPWKVWYE YTGGERPRAA FSAGWGALAM ENNLEKWDVC VFELLDQEYN  660
IKLHVHKVVL MITPCILAPK PRIDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.11e-13B3 family protein