PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG056440.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 203aa MW: 21021.4 Da PI: 6.2612 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.7 | 1.9e-15 | 17 | 66 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 y+G+r ++ g+Wv+eIr+p+ + +r++lg+f ta++Aa a++ a+ +l+g+ TRIDC5AG056440.1 17 LYRGIR--SRYGKWVSEIREPR----KaRRIWLGTFPTADMAAVAYDVAAHALRGA 66 69***5..779*********94....36*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
AAIALADQSM SSGKHPLYRG IRSRYGKWVS EIREPRKARR IWLGTFPTAD MAAVAYDVAA 60 HALRGADAAL NFPGLAATRP APASTSADGI RAAAAAAAAS IRHDRTSGGI TPAAAGSAVQ 120 QQLGGTGSSA AAASASGTAQ QDQAGIGLNQ YFLDEEALFE TPQFLRNMAA GMMMSPPRLS 180 PDSCDESPDP SEAGESLWSY RDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-23 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG056440.1 |