PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG056090.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 372aa MW: 41139.8 Da PI: 5.5217

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG056090.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	105.8	3.4e-33	66	157	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+ye+++d+++++++sw gn+fvv+d + f+ +Lp+yFkhsnf+SFvRQLn+YgF+kv+ ++ weF+ + F +g+kell TRIDC5AG056090.2 66 FLNKTYEVVDDHSTDTIVSWGVAGNTFVVWDAHAFSMVLLPRYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFAAEGFLRGQKELL 149 9**************************************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r++ TRIDC5AG056090.2 150 KTIRRRRP 157 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MDPFHGIVKE EEFDFAGGAA DGYSPSSWGS SPSSWGSSPS SWAGGGALAE LPRPMDGLGE 60 ACPTPFLNKT YEVVDDHSTD TIVSWGVAGN TFVVWDAHAF SMVLLPRYFK HSNFSSFVRQ 120 LNTYGFRKVD PDRWEFAAEG FLRGQKELLK TIRRRRPQSS PAGTPALLQQ GQQQGACLEV 180 GHFGPEGKVQ RLQRDKGTLI AEVVKLRQEQ QATRAQMQEM EARLAATEQK QQQMTVFLAR 240 AMKSPSFLQM LVERQDQSRR KELAEALLSK KRGRPIEYLL PRNGESSYGA PARGYGPGLA 300 DGGEGRRADG EDTESFWKEL LSLGLEERHR EAGGGGGGEA SGAEVDDDVD DEVDELVQSL 360 YHLRPNRPRS YQ

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MDPFHGIVKE EEFDFAGGAA DGYSPSSWGS SPSSWGSSPS SWAGGGALAE LPRPMDGLGE  60
ACPTPFLNKT YEVVDDHSTD TIVSWGVAGN TFVVWDAHAF SMVLLPRYFK HSNFSSFVRQ  120
LNTYGFRKVD PDRWEFAAEG FLRGQKELLK TIRRRRPQSS PAGTPALLQQ GQQQGACLEV  180
GHFGPEGKVQ RLQRDKGTLI AEVVKLRQEQ QATRAQMQEM EARLAATEQK QQQMTVFLAR  240
AMKSPSFLQM LVERQDQSRR KELAEALLSK KRGRPIEYLL PRNGESSYGA PARGYGPGLA  300
DGGEGRRADG EDTESFWKEL LSLGLEERHR EAGGGGGGEA SGAEVDDDVD DEVDELVQSL  360
YHLRPNRPRS YQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	2e-84	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG056090.2