PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG055560.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 196aa MW: 21989.7 Da PI: 7.1131 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 49.7 | 1.2e-15 | 60 | 139 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ evGF +r ks+++ ng+ +++ vC + gk+e+e+++ + r +C a++++++++dg w+v + HnHel TRIDC5AG055560.5 60 EFYNLYSWEVGFGIRYGKSRQN-VNGTKCMQEIVCGCAGKPERENSS---------SLRSDCAAMVRLHRTDDGGWYVLENCASHNHELL 139 6*****************9998.77889999*********9987666.........99******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
RRRRAPLSAL AGSAGRPRVA RAPDERAAVV GRVPALEAAI RGLARRTDVV VNPSMAEAYE 60 FYNLYSWEVG FGIRYGKSRQ NVNGTKCMQE IVCGCAGKPE RENSSSLRSD CAAMVRLHRT 120 DDGGWYVLEN CASHNHELLR TCAEKLHWPS HRHIDTYTKD LCETAAGEQC ESMEGLQYLW 180 QPVWANEECT VHEEVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18960.1 | 2e-09 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG055560.5 |