PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG055560.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 231aa    MW: 25903.4 Da    PI: 6.0877
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG055560.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.21.7e-1595174190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ evGF +r  ks+++  ng+  +++ vC + gk+e+e+++         + r +C a++++++++dg w+v +    HnHel 
  TRIDC5AG055560.1  95 EFYNLYSWEVGFGIRYGKSRQN-VNGTKCMQEIVCGCAGKPERENSS---------SLRSDCAAMVRLHRTDDGGWYVLENCASHNHELL 174
                       6*****************9998.77889999*********9987666.........99******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
FSLPRGAWYC RTKLEFVLHL APLLFSDLGL EVRLDLSMAT PTATTPALAF GPRVARAPDE  60
RAAVVGRVPA LEAAIRGLAR RTDVVVNPSM AEAYEFYNLY SWEVGFGIRY GKSRQNVNGT  120
KCMQEIVCGC AGKPERENSS SLRSDCAAMV RLHRTDDGGW YVLENCASHN HELLRTCAEK  180
LHWPSHRHID TYTKDLCETA AGEQCESMEG LQYLWQPVWA NEECTVHEEV P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.12e-09FAR1 family protein