PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG054980.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 839aa    MW: 91301.9 Da    PI: 6.3324
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG054980.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.74e-181370457
                      -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                        ++t+eq+++Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  TRIDC5AG054980.2 13 YVRYTPEQVDALERVYSECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 70
                      6789****************************************************97 PP

2START175.14.2e-551623692204
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++ +++l+ i +g  g+++
  TRIDC5AG054980.2 162 IAEETLAEFLSKATGTAVDWVQMVGMKPGPDSIGIVAVSHNCSGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDVLQIIPTGngGTIE 253
                       68999*****************************************************.8888888888************************ PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l++++++a+++l++ Rdf+++Ry+  l++g+++i+++S+++ +  p+   ++++vRae+lpSg+li+p+++g+s +++v+hvdl++++++++l
  TRIDC5AG054980.2 254 LIYMQTYAPTTLAApRDFWILRYTSGLEDGSLAICERSLTQATGGPSgpnTPNFVRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVL 346
                       ************999*****************************999999******************************************* PP

                       HHHHHHHHHHHHHHHHHHTXXXX CS
             START 182 rslvksglaegaktwvatlqrqc 204
                       r+l++s  + ++k++ a+l++ +
  TRIDC5AG054980.2 347 RPLYESPKILAQKMTIAALRHIR 369
                       ******************99865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
GGSGAPQVDT GKYVRYTPEQ VDALERVYSE CPKPSSLRRQ QLIRECPILS NIEPKQIKVW  60
FQNRRCREKQ RKEASRLQTV NRKLSAMNKL LMEENDRLQK QVSRLVYENG YMRTHLNNPS  120
VATTDTSCES VVTSGQHQQQ QQNAVVPRPQ RDANNPAGLL AIAEETLAEF LSKATGTAVD  180
WVQMVGMKPG PDSIGIVAVS HNCSGVAARA CGLVSLEPTK VAEILKDRPS WYRDCRCVDV  240
LQIIPTGNGG TIELIYMQTY APTTLAAPRD FWILRYTSGL EDGSLAICER SLTQATGGPS  300
GPNTPNFVRA EVLPSGYLIR PCEGGGSMIH IVDHVDLDAW SVPEVLRPLY ESPKILAQKM  360
TIAALRHIRQ IAHESSGEMP YGGGRQPAVL RTFSQRLSRG FNDAVNGFLD DGWSLMSSDG  420
AEDVTIAINS SPNKLAGSHV NPSQMFTAIG GGVLCAKASM LLQNVPPALL VRFLREHRSE  480
WADPGVDAYS AAALRASPYA VPGLRASGFM GSQVILPLAH TLEHEEFLEV IRLEGHSLCH  540
DEVVLSRDMY LLQLCSGVDE NAAGACAQLV FAPIDESFAD DAPLLPSGFR VIPLDAKTDA  600
PSATRTLDLA STLEVGPGGT RAPSDASSTS NTRSVLTIAF QFSYENHLRE SVAAMARQYV  660
RTVVASVQRV AMAIAPSRPG GQLEMKNPPG SPEAHTLARW IGRSYRFHTG AELLCTESQS  720
ADASLKALWQ HSDSIMCCSL KAAPVFTFAN QAGLDMLETT LIALQDISLE KILDDDGRKA  780
LCSEFPKIMQ QGFAYLPGGV CVSSMGRPVS YEQAVAWKVL GDDDAPHCLA FMFVNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein