PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG054920.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 299aa MW: 33151.1 Da PI: 4.6402 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.2 | 3.7e-08 | 5 | 54 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwq 45 +++WT eE+ l +++++G g+W++I + R+ ++k++w+ TRIDC5AG054920.3 5 KQKWTSEEEAALRAGIARYGVGSWRLILKDDDfrsilSCRSNVDLKDKWR 54 79**************************9988555555566666666666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MGARKQKWTS EEEAALRAGI ARYGVGSWRL ILKDDDFRSI LSCRSNVDLK DKWRNINVFF 60 TESGSMDKGR TAMKKNRAAP RRNDHPMANS TVASDVDDEI VDEQPIASMS SELWNVSIPK 120 KSRSRLNNII LESVKNLNEP TGSHSTTIAK YIEEEYWPPS DFDRMLSANL KDLTTSGELI 180 EVNRKYRIAP APGSMYSEGR SPETLLLEDM QREPQKIESD DIKTLTKSQV DAELADMITM 240 TAEEAASAAA RAIAEAEALM AEAEAATRDA EAAEADAQAA QAFAEAVRNR NVTELMAQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 1e-54 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG054920.3 |