PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG054920.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 299aa    MW: 33151.1 Da    PI: 4.6402
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG054920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.23.7e-08554145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwq 45
                      +++WT eE+  l  +++++G g+W++I +          R+  ++k++w+
  TRIDC5AG054920.1  5 KQKWTSEEEAALRAGIARYGVGSWRLILKDDDfrsilSCRSNVDLKDKWR 54
                      79**************************9988555555566666666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MGARKQKWTS EEEAALRAGI ARYGVGSWRL ILKDDDFRSI LSCRSNVDLK DKWRNINVFF  60
TESGSMDKGR TAMKKNRAAP RRNDHPMANS TVASDVDDEI VDEQPIASMS SELWNVSIPK  120
KSRSRLNNII LESVKNLNEP TGSHSTTIAK YIEEEYWPPS DFDRMLSANL KDLTTSGELI  180
EVNRKYRIAP APGSMYSEGR SPETLLLEDM QREPQKIESD DIKTLTKSQV DAELADMITM  240
TAEEAASAAA RAIAEAEALM AEAEAATRDA EAAEADAQAA QAFAEAVRNR NVTELMAQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-54MYB_related family protein