PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG054530.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 326aa    MW: 35077.4 Da    PI: 9.4509
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG054530.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA97.91.1e-30162218158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       d+p+YVNaKQy++Il+RR +Rak+e+e++l  k+rkpylheSRh+hA+rR+Rg+gGrF
  TRIDC5AG054530.1 162 DAPIYVNAKQYEGILRRRRARAKVERENQL-VKGRKPYLHESRHRHAMRRARGTGGRF 218
                       68****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MMSFKGHDGF GQASNGGGGG ASVPWWTVSQ MLYGEPGASL SSSPEAEPRR DAQFQVVPRA  60
QGILDPLPAP KSGAPEVLKF SVFQGNLESG GNKGEKPMEH SATIALQSPL PEYNSRFEFG  120
PGPSMMSSGY PSAEQCYGLL TTYAMKSTPG GRLLLPLNAT ADAPIYVNAK QYEGILRRRR  180
ARAKVERENQ LVKGRKPYLH ESRHRHAMRR ARGTGGRFLN TKKEGNGKDA GGGGKRAECA  240
PPTRFATSPS SVIPSNPHSR SSISSLSGSE VSSMYDHDDV DHYNSIEHLR TPFFTPLPII  300
MDGEHGASAP FKWATAADGC CELLKA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203212RHRHAMRRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.25e-24NF-YA family protein