PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG054330.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 105aa MW: 11487.3 Da PI: 8.3998 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 98.6 | 1.4e-30 | 6 | 71 | 5 | 72 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeell 72 +e+vCyv+CnfCntilavsvPs+s++++vtvrCGhCtsllsvnl+ q ++++h ++ e+++ TRIDC5AG054330.7 6 APPEHVCYVHCNFCNTILAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLIQSPPVQDH--SQGVERMV 71 679******************************************************9..44444433 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence |
MSAQIAPPEH VCYVHCNFCN TILAVSVPSN SMLNIVTVRC GHCTSLLSVN LRGLIQSPPV 60 QDHSQGVERM VSTPTGRERR ISRPTISAFV EITRTMAHLL NTGCQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 5e-19 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG054330.7 |