PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG054330.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 162aa MW: 18493 Da PI: 10.3691 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 194.2 | 6e-60 | 2 | 137 | 24 | 170 |
YABBY 24 vsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsened.eevprvppv 115 vsvPs+s++++vtvrCGhCtsllsvnl+ q ++++h +e+ k ++ +++ n+ + ++s+++ +++s+++d e++ + TRIDC5AG054330.3 2 VSVPSNSMLNIVTVRCGHCTSLLSVNLRGLIQSPPVQDH--------SQENFKAHNISFRGNYPDYGTSSKYRMPMMFSTKSDqEHMLH---- 82 9*************************************9........7899999**********9999998888777766655055554.... PP YABBY 116 irPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +rPPekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahfP+ihfgl TRIDC5AG054330.3 83 MRPPEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHFPNIHFGL 137 8****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
RVSVPSNSML NIVTVRCGHC TSLLSVNLRG LIQSPPVQDH SQENFKAHNI SFRGNYPDYG 60 TSSKYRMPMM FSTKSDQEHM LHMRPPEKRQ RVPSAYNRFI KEEIRRIKTN NPDISHREAF 120 STAAKNWAHF PNIHFGLGSN ESSKKLDEAI AAPIPQKVQG LY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 4e-54 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG054330.3 |