PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG054330.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 193aa    MW: 21780.8 Da    PI: 9.4736
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG054330.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY234.32.8e-72131685170
             YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvs 97 
                         +e+vCyv+CnfCntilavsvPs+s++++vtvrCGhCtsllsvnl+   q  ++++h         +e+ k ++ +++ n+  + ++s+++ 
  TRIDC5AG054330.2  13 APPEHVCYVHCNFCNTILAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLIQSPPVQDH--------SQENFKAHNISFRGNYPDYGTSSKYRM 97 
                       679******************************************************9........7899999*********99999988887 PP

             YABBY  98 sekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                        +++ +++++e++ ++ p    PekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahfP+ihfgl
  TRIDC5AG054330.2  98 PMMFsTKSDQEHMLHMRP---APEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHFPNIHFGL 168
                       767734556667777655...6**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
ATSAREIMSA QIAPPEHVCY VHCNFCNTIL AVSVPSNSML NIVTVRCGHC TSLLSVNLRG  60
LIQSPPVQDH SQENFKAHNI SFRGNYPDYG TSSKYRMPMM FSTKSDQEHM LHMRPAPEKR  120
QRVPSAYNRF IKEEIRRIKT NNPDISHREA FSTAAKNWAH FPNIHFGLGS NESSKKLDEA  180
IAAPIPQKVQ GLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.19e-63YABBY family protein