PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG054330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 197aa MW: 22369.5 Da PI: 9.8046 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 234.2 | 3e-72 | 17 | 172 | 5 | 170 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvs 97 +e+vCyv+CnfCntilavsvPs+s++++vtvrCGhCtsllsvnl+ q ++++h +e+ k ++ +++ n+ + ++s+++ TRIDC5AG054330.1 17 APPEHVCYVHCNFCNTILAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLIQSPPVQDH--------SQENFKAHNISFRGNYPDYGTSSKYRM 101 679******************************************************9........7899999*********99999988887 PP YABBY 98 sekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++ +++++e++ ++ p PekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahfP+ihfgl TRIDC5AG054330.1 102 PMMFsTKSDQEHMLHMRP---APEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHFPNIHFGL 172 767734556667777655...6**************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
RRYLATSARE IMSAQIAPPE HVCYVHCNFC NTILAVSVPS NSMLNIVTVR CGHCTSLLSV 60 NLRGLIQSPP VQDHSQENFK AHNISFRGNY PDYGTSSKYR MPMMFSTKSD QEHMLHMRPA 120 PEKRQRVPSA YNRFIKEEIR RIKTNNPDIS HREAFSTAAK NWAHFPNIHF GLGSNESSKK 180 LDEAIAAPIP QKVQGLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 9e-63 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG054330.1 |