PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG053140.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 364aa MW: 40489.3 Da PI: 5.3381

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG053140.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.9	2.4e-10	60	119	36	98
EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++ ++ ++ v + +++++vl++GW +Fv +++++++Df++F +g +++l+v v++ TRIDC5AG053140.10 60 VKIVAPDKSTYIVGA-KKHNDDQIVLQSGWDRFVTDQRIQQNDFLIFIIEG--GTRLKVLVLD 119 666666777777777.3556667*************************765..6667888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MLPGSFVTKA QDDKLLEWAN TIKSGFPLFV AAMDESNVSL NDCHVYIPLW LVGQFKEEVV 60 KIVAPDKSTY IVGAKKHNDD QIVLQSGWDR FVTDQRIQQN DFLIFIIEGG TRLKVLVLDP 120 SGSEKTFAMG NSSKVQEKPP LPPTVTNRSS EDNEVADLSS DDEVIDPSCD DDEVVGKDTT 180 ASRREQPLRS CRAKAETMAS TSCPSTKSGR KAGNSNEAGL KAPMPNKSYI LSEGASLSKQ 240 QEEKVKEKVR AIGSDFPVFV RVMTVHGVWR PIQLRFCVEY GSACPLPLQQ TPLLLGIEGS 300 DMQWPSMLVV KKYKKGWWIS SFWSDLVLEA GMEAGDICLV ELADRSSERL RMTVHLIRKS 360 EMQL

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MLPGSFVTKA QDDKLLEWAN TIKSGFPLFV AAMDESNVSL NDCHVYIPLW LVGQFKEEVV  60
KIVAPDKSTY IVGAKKHNDD QIVLQSGWDR FVTDQRIQQN DFLIFIIEGG TRLKVLVLDP  120
SGSEKTFAMG NSSKVQEKPP LPPTVTNRSS EDNEVADLSS DDEVIDPSCD DDEVVGKDTT  180
ASRREQPLRS CRAKAETMAS TSCPSTKSGR KAGNSNEAGL KAPMPNKSYI LSEGASLSKQ  240
QEEKVKEKVR AIGSDFPVFV RVMTVHGVWR PIQLRFCVEY GSACPLPLQQ TPLLLGIEGS  300
DMQWPSMLVV KKYKKGWWIS SFWSDLVLEA GMEAGDICLV ELADRSSERL RMTVHLIRKS  360
EMQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	5e-13	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG053140.10