PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG051060.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 599aa MW: 65828.3 Da PI: 7.7307

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG051060.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.2	1.6e-28	283	333	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5AG051060.6 283 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 333 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
LMISWLLLLI INQFNSASYK DALPEILEVL RAACVTHNLP LAQTWVTCAQ QGKGGSRHTD 60 ENYPYCISTI DTACYVNDPQ MQNFHDSCSD HHLLRGQGVA GKAFETNQPC FLPDIGSSAK 120 EHYPLSHHAK IFNLKGAVAI RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR 180 SACRTLRVVT DKEIGDEEML EVNELNSFGP QGKNKVEELS FGNQATEHRE EASWTSLART 240 SKESDLAELS MHGMLSPVGQ GLSPAGAQTS AQGSKGKRRT KTEKTVSLPV LRQYFAGSLK 300 DAARSLGVCP TTLKRICRQH GINRWPSRKI KKVDHSLRKL QQIIDSVHGG ETAFQLNTLY 360 KDLTNTSVSS DNNLSGSVTV PPHKQSNLTD FEGHRHHRLS SNVPSTSHSH SSCSQSSDSS 420 PSSCSGGSTK HPPQAGVDLL MSGNPVNHSP VQTLQTENAS IRGHFPVQEA PDLLHNLNQQ 480 ALGGQHSSRS PSPPKQNADA GMRIKATFGS EKVRFRLKPE CSFQELKQEM ARRLSIVDTS 540 FLIVKYLDDD LEWVLMTCDA DLQECLHVYK LANLQTVKIS VHLAPIPEAR VTIGHTGLS

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

LMISWLLLLI INQFNSASYK DALPEILEVL RAACVTHNLP LAQTWVTCAQ QGKGGSRHTD  60
ENYPYCISTI DTACYVNDPQ MQNFHDSCSD HHLLRGQGVA GKAFETNQPC FLPDIGSSAK  120
EHYPLSHHAK IFNLKGAVAI RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR  180
SACRTLRVVT DKEIGDEEML EVNELNSFGP QGKNKVEELS FGNQATEHRE EASWTSLART  240
SKESDLAELS MHGMLSPVGQ GLSPAGAQTS AQGSKGKRRT KTEKTVSLPV LRQYFAGSLK  300
DAARSLGVCP TTLKRICRQH GINRWPSRKI KKVDHSLRKL QQIIDSVHGG ETAFQLNTLY  360
KDLTNTSVSS DNNLSGSVTV PPHKQSNLTD FEGHRHHRLS SNVPSTSHSH SSCSQSSDSS  420
PSSCSGGSTK HPPQAGVDLL MSGNPVNHSP VQTLQTENAS IRGHFPVQEA PDLLHNLNQQ  480
ALGGQHSSRS PSPPKQNADA GMRIKATFGS EKVRFRLKPE CSFQELKQEM ARRLSIVDTS  540
FLIVKYLDDD LEWVLMTCDA DLQECLHVYK LANLQTVKIS VHLAPIPEAR VTIGHTGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	1e-115	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG051060.6