PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG051060.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 858aa MW: 93991.7 Da PI: 7.0619

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG051060.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.6	2.5e-28	542	592	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5AG051060.2 542 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 592 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 858 aa Download sequence
EGGHRTITSS EGSFTCMEGG DAPPGISMGR AMSSEGDLDL LEQLLSGDNA WLEVAPNTSR 60 SPNFFASPST FLSDATATTT TTPAGANSTL WIPPASSTVR QRFEQALDYI KQMQRDAGML 120 VQLWVPQKNC DGKLVLTTSG QPFTLDNTSD RLMQFRDVST HYHFSADVGS EASPVGLPGR 180 VFIGKLPEWS PDVRLFTSYE YPRVKYAQDL DVHGTMGLPV FEKGSYSCLG VMELIMTRQK 240 LNFTSEINDI CRALQAVNLR STEVSSTPRA TKFNSASYKD ALPEILEVLR AACVTHNLPL 300 AQTWVTCAQQ GKGGSRHTDE NYPYCISTID TACYVNDPQM QNFHDSCSDH HLLRGQGVAG 360 KAFETNQPCF LPDIGSSAKE HYPLSHHAKI FNLKGAVAIR LRCTRTGTAD FVLEFFLPTN 420 CEALEEQKAV LDSLSGTMRS ACRTLRVVTD KEIGDEEMLE VNELNSFGPQ GKNKVEELSF 480 GNQATEHREE ASWTSLARTS KESDLAELSM HGMLSPVGQG LSPAGAQTSA QGSKGKRRTK 540 TEKTVSLPVL RQYFAGSLKD AARSLGVCPT TLKRICRQHG INRWPSRKIK KVDHSLRKLQ 600 QIIDSVHGGE TAFQLNTLYK DLTNTSVSSD NNLSGSVTVP PHKQSNLTDF EGHRHHRLSS 660 NVPSTSHSHS SCSQSSDSSP SSCSGGSTKH PPQAGVDLLM SGNPVNHSPV QTLQTENASI 720 RGHFPVQEAP DLLHNLNQQA LGGQHSSRSP SPPKQNADAG MRIKATFGSE KVRFRLKPEC 780 SFQELKQEMA RRLSIVDTSF LIVKYLDDDL EWVLMTCDAD LQECLHVYKL ANLQTVKISV 840 HLAPIPEARV TIGHTGLS

Sequence ? help Back to Top

Protein Sequence Length: 858 aa Download sequence

EGGHRTITSS EGSFTCMEGG DAPPGISMGR AMSSEGDLDL LEQLLSGDNA WLEVAPNTSR  60
SPNFFASPST FLSDATATTT TTPAGANSTL WIPPASSTVR QRFEQALDYI KQMQRDAGML  120
VQLWVPQKNC DGKLVLTTSG QPFTLDNTSD RLMQFRDVST HYHFSADVGS EASPVGLPGR  180
VFIGKLPEWS PDVRLFTSYE YPRVKYAQDL DVHGTMGLPV FEKGSYSCLG VMELIMTRQK  240
LNFTSEINDI CRALQAVNLR STEVSSTPRA TKFNSASYKD ALPEILEVLR AACVTHNLPL  300
AQTWVTCAQQ GKGGSRHTDE NYPYCISTID TACYVNDPQM QNFHDSCSDH HLLRGQGVAG  360
KAFETNQPCF LPDIGSSAKE HYPLSHHAKI FNLKGAVAIR LRCTRTGTAD FVLEFFLPTN  420
CEALEEQKAV LDSLSGTMRS ACRTLRVVTD KEIGDEEMLE VNELNSFGPQ GKNKVEELSF  480
GNQATEHREE ASWTSLARTS KESDLAELSM HGMLSPVGQG LSPAGAQTSA QGSKGKRRTK  540
TEKTVSLPVL RQYFAGSLKD AARSLGVCPT TLKRICRQHG INRWPSRKIK KVDHSLRKLQ  600
QIIDSVHGGE TAFQLNTLYK DLTNTSVSSD NNLSGSVTVP PHKQSNLTDF EGHRHHRLSS  660
NVPSTSHSHS SCSQSSDSSP SSCSGGSTKH PPQAGVDLLM SGNPVNHSPV QTLQTENASI  720
RGHFPVQEAP DLLHNLNQQA LGGQHSSRSP SPPKQNADAG MRIKATFGSE KVRFRLKPEC  780
SFQELKQEMA RRLSIVDTSF LIVKYLDDDL EWVLMTCDAD LQECLHVYKL ANLQTVKISV  840
HLAPIPEARV TIGHTGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG051060.2