PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG048160.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 1451aa    MW: 163398 Da    PI: 7.5353
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG048160.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS415.45e-127108114501373
              GRAS    1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91  
                        l++lL++cA+av+++d  +++ ++ +l e++s +g+p+qRl  y++e+L arla+s++++y+al+ ++ +    se +++++ ++ v+P+l
  TRIDC5AG048160.6 1081 LKKLLMSCARAVDEKDSLAIDMTVPELGENVSVSGKPLQRLGEYMVEGLVARLASSGHSIYRALKWQKPH---GSEMISYQRELYAVCPYL 1168
                        5799*************************************************************99999...9***************** PP

              GRAS   92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180 
                        kf+++ aN aI eav ge+++HiiDf isqG+QW++L+qaLa+Rp+gpp++RiT ++++es   +   le +g+ L+++A+e+g+pfef++
  TRIDC5AG048160.6 1169 KFGYVSANGAIAEAVRGEDMIHIIDFRISQGVQWISLIQALAARPGGPPTVRITCIDDSESAyvRGGGLEILGNTLSDIAREFGLPFEFHA 1259
                        **********************************************************99889999************************* PP

              GRAS  181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271 
                        l   +++ +e  +L v pgEa+aVn+ l lh+++desvs +++rd++L+lvk+lsPkvv++veqe+++n+++F +rf+e+l+yy+a+f+s+
  TRIDC5AG048160.6 1260 L-DISVSGVEEGHLGVIPGEAVAVNFNLTLHQIPDESVSAANHRDRILRLVKQLSPKVVTIVEQELNTNTGPFTQRFAETLDYYTAIFESI 1349
                        6.668999*********************************************************************************** PP

              GRAS  272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgW 362 
                        +++ pre +er+k+E+++l+r+ivn+vacegaer+erhe ++kW++rl++aGF+p+pl++++ ++ ++ll+ ++s+ yr+ e++g ++lgW
  TRIDC5AG048160.6 1350 DVERPREPKERTKMEQHCLARKIVNIVACEGAERVERHEVFSKWNARLTMAGFRPLPLGSRVKDNLRTLLHYYSSN-YRLAERDGVIYLGW 1439
                        ***********************************************************************99977.************** PP

              GRAS  363 kdrpLvsvSaW 373 
                        k+r+Lv+ SaW
  TRIDC5AG048160.6 1440 KNRALVVSSAW 1450
                        *********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 1451 aa     Download sequence    
MEVGWALKKK GEEWRSALQE RGAEHTSFLA EEHSGQVTSL VDLADLEEGL TDRSINDSGF  60
SSTSFPTEGE VLGQHRSVFF DPTKGLWECR HCDWTHQLIS PCRNVDFPNY QRCGQVTMEA  120
PFDMGFLLGK LGMLLAPQGC RLPSRVKDRM HLLKEDVEDL SEYLAEMAEA EDLPLTAKRW  180
MKEARELAYD IEDNMDMCLR PAIKTTRFIC KIGRVKIPKR LFSKRVLPRG LKQIAYTAQV  240
PAEHGGKTRS VCKAIRVVIN CLPRRLRWYK HIMELISDFR VYIQEAIERH ERYELHCYST  300
FRRRFVSAGC TLPTPYGGIA NMVIDGRVSE FIDSLDNDRD QQLKVVSVLG SGCLGKTALA  360
QVLYNKFAGQ FDCTAFIQVS KRPDVVRLFR DMLTQVQGQQ PTEDSKELDL ASSIRKHLQD  420
KRYLIIIDDI WTASTWDIIS HAFPKRNRGS RVITTTQMEE VALTCCCYHS KHIFEMRPLD  480
HDHSRKLFFN ILFGSESDCP KELKEVTNKI VELCGGLPLA TISIASLLSS QPVIKMDLLA  540
YLCDSLSSCL WTSPSEGTRQ VLNLSYNNLP RYLKICLLCL SMYPKGHTMW KDDLVKQWVA  600
EGFIHTTGVQ DMEKVAASYF DELIKRRFIQ PLCIKYNNEV SSCTIHDVVH DLIADKSKEE  660
NFNVVIDSSR KNVALSHKVR RLSLLFGDAK YAKTPENMRR SQVRSLTFFG LFESMPSISE  720
FKLLRVLSLQ LSGYGGRGTI NLTGISDLFQ LRYLKIASDI CIQLPEHMLG LHCLETLVMD  780
SEATAVPWDI IHLPSLSHLS LLVMTNLLHW LGSMRFVGKL NNLRDLHLTF SVPSSDYLKR  840
SIEALGSLLS GHGNLKTLAL VNGLCHRNTV VRGASKVTVS WDGLVPPPLL EVFDWSLRSC  900
ILSRIPKWIG KLGELHILKI AARELAMDGI DALRGLPALT DLSLYLQTAA VERIVFDKGG  960
FSVLNYFKLR CSVPCLKFEA NSMPNLQKLK LGFNAPRPLI DQHGASTAIS IGHLPCLREI  1020
YAKIGGACAD AESALATAIS NHPSNPRISV QLVDYTFDGD EITHDKNEQD EVVEEDRVGY  1080
LKKLLMSCAR AVDEKDSLAI DMTVPELGEN VSVSGKPLQR LGEYMVEGLV ARLASSGHSI  1140
YRALKWQKPH GSEMISYQRE LYAVCPYLKF GYVSANGAIA EAVRGEDMIH IIDFRISQGV  1200
QWISLIQALA ARPGGPPTVR ITCIDDSESA YVRGGGLEIL GNTLSDIARE FGLPFEFHAL  1260
DISVSGVEEG HLGVIPGEAV AVNFNLTLHQ IPDESVSAAN HRDRILRLVK QLSPKVVTIV  1320
EQELNTNTGP FTQRFAETLD YYTAIFESID VERPREPKER TKMEQHCLAR KIVNIVACEG  1380
AERVERHEVF SKWNARLTMA GFRPLPLGSR VKDNLRTLLH YYSSNYRLAE RDGVIYLGWK  1440
NRALVVSSAW H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-150GRAS family protein