PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG048160.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 1334aa    MW: 150173 Da    PI: 8.0378
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG048160.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS415.64.3e-12796413331373
              GRAS    1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91  
                        l++lL++cA+av+++d  +++ ++ +l e++s +g+p+qRl  y++e+L arla+s++++y+al+ ++ +    se +++++ ++ v+P+l
  TRIDC5AG048160.1  964 LKKLLMSCARAVDEKDSLAIDMTVPELGENVSVSGKPLQRLGEYMVEGLVARLASSGHSIYRALKWQKPH---GSEMISYQRELYAVCPYL 1051
                        5799*************************************************************99999...9***************** PP

              GRAS   92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180 
                        kf+++ aN aI eav ge+++HiiDf isqG+QW++L+qaLa+Rp+gpp++RiT ++++es   +   le +g+ L+++A+e+g+pfef++
  TRIDC5AG048160.1 1052 KFGYVSANGAIAEAVRGEDMIHIIDFRISQGVQWISLIQALAARPGGPPTVRITCIDDSESAyvRGGGLEILGNTLSDIAREFGLPFEFHA 1142
                        **********************************************************99889999************************* PP

              GRAS  181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271 
                        l   +++ +e  +L v pgEa+aVn+ l lh+++desvs +++rd++L+lvk+lsPkvv++veqe+++n+++F +rf+e+l+yy+a+f+s+
  TRIDC5AG048160.1 1143 L-DISVSGVEEGHLGVIPGEAVAVNFNLTLHQIPDESVSAANHRDRILRLVKQLSPKVVTIVEQELNTNTGPFTQRFAETLDYYTAIFESI 1232
                        6.668999*********************************************************************************** PP

              GRAS  272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgW 362 
                        +++ pre +er+k+E+++l+r+ivn+vacegaer+erhe ++kW++rl++aGF+p+pl++++ ++ ++ll+ ++s+ yr+ e++g ++lgW
  TRIDC5AG048160.1 1233 DVERPREPKERTKMEQHCLARKIVNIVACEGAERVERHEVFSKWNARLTMAGFRPLPLGSRVKDNLRTLLHYYSSN-YRLAERDGVIYLGW 1322
                        ***********************************************************************99977.************** PP

              GRAS  363 kdrpLvsvSaW 373 
                        k+r+Lv+ SaW
  TRIDC5AG048160.1 1323 KNRALVVSSAW 1333
                        *********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 1334 aa     Download sequence    
MEAPFDMGFL LGKLGMLLAP QGCRLPSRVK DRMHLLKEDV EDLSEYLAEM AEAEDLPLTA  60
KRWMKEAREL AYDIEDNMDM CLRPAIKTTR FICKIGRVKI PKRLFSKRVL PRGLKQIAYT  120
AQVPAEHGGK TRSVCKAIRV VINCLPRRLR WYKHIMELIS DFRVYIQEAI ERHERYELHC  180
YSTFRRRFVS AGCTLPTPYG GIANMVIDGR VSEFIDSLDN DRDQQLKVVS VLGSGCLGKT  240
ALAQVLYNKF AGQFDCTAFI QVSKRPDVVR LFRDMLTQVQ GQQPTEDSKE LDLASSIRKH  300
LQDKRYLIII DDIWTASTWD IISHAFPKRN RGSRVITTTQ MEEVALTCCC YHSKHIFEMR  360
PLDHDHSRKL FFNILFGSES DCPKELKEVT NKIVELCGGL PLATISIASL LSSQPVIKMD  420
LLAYLCDSLS SCLWTSPSEG TRQVLNLSYN NLPRYLKICL LCLSMYPKGH TMWKDDLVKQ  480
WVAEGFIHTT GVQDMEKVAA SYFDELIKRR FIQPLCIKYN NEVSSCTIHD VVHDLIADKS  540
KEENFNVVID SSRKNVALSH KVRRLSLLFG DAKYAKTPEN MRRSQVRSLT FFGLFESMPS  600
ISEFKLLRVL SLQLSGYGGR GTINLTGISD LFQLRYLKIA SDICIQLPEH MLGLHCLETL  660
VMDSEATAVP WDIIHLPSLS HLSLLVMTNL LHWLGSMRFV GKLNNLRDLH LTFSVPSSDY  720
LKRSIEALGS LLSGHGNLKT LALVNGLCHR NTVVRGASKV TVSWDGLVPP PLLEVFDWSL  780
RSCILSRIPK WIGKLGELHI LKIAARELAM DGIDALRGLP ALTDLSLYLQ TAAVERIVFD  840
KGGFSVLNYF KLRCSVPCLK FEANSMPNLQ KLKLGFNAPR PLIDQHGAST AISIGHLPCL  900
REIYAKIGGA CADAESALAT AISNHPSNPR ISVQLVDYTF DGDEITHDKN EQDEVVEEDR  960
VGYLKKLLMS CARAVDEKDS LAIDMTVPEL GENVSVSGKP LQRLGEYMVE GLVARLASSG  1020
HSIYRALKWQ KPHGSEMISY QRELYAVCPY LKFGYVSANG AIAEAVRGED MIHIIDFRIS  1080
QGVQWISLIQ ALAARPGGPP TVRITCIDDS ESAYVRGGGL EILGNTLSDI AREFGLPFEF  1140
HALDISVSGV EEGHLGVIPG EAVAVNFNLT LHQIPDESVS AANHRDRILR LVKQLSPKVV  1200
TIVEQELNTN TGPFTQRFAE TLDYYTAIFE SIDVERPREP KERTKMEQHC LARKIVNIVA  1260
CEGAERVERH EVFSKWNARL TMAGFRPLPL GSRVKDNLRT LLHYYSSNYR LAERDGVIYL  1320
GWKNRALVVS SAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-151GRAS family protein