PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG047450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 240aa MW: 26857.3 Da PI: 4.3876 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.2 | 5e-10 | 42 | 65 | 23 | 47 |
-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47 +W++Ia++++ gRt++++k++w+++ TRIDC5AG047450.1 42 RWSKIAAKLP-GRTDNEIKNHWNTH 65 5*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MQIIYLIILK SYEILNALLK AFVYFPYVYY YLVLILSMAL CRWSKIAAKL PGRTDNEIKN 60 HWNTHIKKKL IKMGIDPITH VPLEVRKQPQ QASLSTMSAQ SSTITIECKS NNGQQCQQQD 120 THINRDKDAS SVGGESSPPN LSGTNTDNTT GGSNNIHDQD PLVKWLLEEE DDLPAIGIIE 180 EPWLDFIVEN DVDKFNGIPS TMSWDIGTTD WLLDYQDFGV GDSTLLDDAS MVDSSSGSNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16600.1 | 1e-21 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG047450.1 |