PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG047190.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SRS
Protein Properties Length: 312aa    MW: 32378.9 Da    PI: 9.2912
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG047190.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702218.91.1e-67972543154
            DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.....aeaaskrkrelkskkq.salsst 89 
                        g++sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa+krrerqqql+a++++aaa++     +++ +kr+r   ++++ +++s t
  TRIDC5AG047190.3  97 GGGTSCQDCGNQAKKDCQHQRCRTCCKSRGFACSTHVKSTWVPASKRRERQQQLTALAASAAATTggagpSRDLTKRPRARLAATTpTTSSGT 189
                       5778****************************************************9999999888888888899999988554440444444 PP

            DUF702  90 klssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                            ++++ + ++++P+evsseavfrcvr++ vd++e+elaYqt+vsigGhvfkGiL+d G+++
  TRIDC5AG047190.3 190 YYIPRDQQMVTVAERFPREVSSEAVFRCVRLGPVDQAEAELAYQTTVSIGGHVFKGILHDVGPSN 254
                       445556777888899***********************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MAGFPLGTGG SGRDSSASPP GVHPSDASTF LYATRGGGFQ LWGQPQDQQQ LTHPFYAPNL  60
IRFATDDLPA GAAQSLAGAA SSSSSRGARA AALAGTGGGT SCQDCGNQAK KDCQHQRCRT  120
CCKSRGFACS THVKSTWVPA SKRRERQQQL TALAASAAAT TGGAGPSRDL TKRPRARLAA  180
TTPTTSSGTY YIPRDQQMVT VAERFPREVS SEAVFRCVRL GPVDQAEAEL AYQTTVSIGG  240
HVFKGILHDV GPSNAHAQLQ AAAGGSAGDA GGGNNHNIVV SSAVVMDPYP TPGLYGSFPA  300
TTPFFHGHPY QR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.14e-42SRS family protein