PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG046620.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 774aa MW: 83536.6 Da PI: 5.8711 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.4 | 1.8e-21 | 65 | 120 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe++F+++++p++++r eL+++l+L+ rqVk+WFqNrR+++k TRIDC5AG046620.5 65 KKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMK 120 688999***********************************************999 PP | |||||||
2 | START | 172.5 | 2.8e-54 | 277 | 502 | 4 | 205 |
HHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS START 4 eeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 ++a++elvk ++++p+W s e +n de+++ f++ + + +ea r++g+ + ++++lv++l++ +W+e+++ +a+t+e TRIDC5AG046620.5 277 LAAMEELVKVTQVDDPLWQPSLdiglETLNFDEYRRAFARVLGpspagYVSEATREVGIAIINSVDLVNSLMNEV-RWSEMFPcvvaRASTME 368 789*******************9***************88666********************************.***************** PP EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--......-TTSEE-EESSEEEEEEEECTCEEEE CS START 84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.....sssvvRaellpSgiliepksnghskv 164 issg g +qlm aelq+lsplvp R+++f+R+++q+ +g wvivdvSvd p + ++++ ++llpSg+++e+++ng+ kv TRIDC5AG046620.5 369 IISSGmggtrsGSIQLMRAELQVLSPLVPiREVTFLRFCKQHADGLWVIVDVSVDGVLRPDSgtgagPAGYMGCRLLPSGCIVEDMQNGYAKV 461 *******************************************************99888877778789************************ PP EEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS START 165 twvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205 twv h++++++ +h+l+r+l++sg+a ga++w+a lqrqce TRIDC5AG046620.5 462 TWVVHAEYDEAAVHELYRPLLRSGQALGARRWLASLQRQCE 502 ****************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 774 aa Download sequence |
GLQTNMEGGG QLGGAFMGST GSGGDGDSLG RAREDENDSR SGSDNLDGAS ADELDPDNSN 60 PRKKKKRYHR HTPQQIQELE AVFKECPHPD EKQRMELSRR LNLESRQVKF WFQNRRTQMK 120 TQIERHENAL LRQENDKLRT ENMTIREAMR SPTCGNCGGA AVLGEVSLEE QHLRIENSRL 180 KDELDRVCAL AGKFLGRPVS AISSPLSLPS SLCSGLDLAV GSNNGFMGMG MQSIPDLMGG 240 GSAAMRLPAG IMGGGLDDGL GGEGVAIDRG ALLELGLAAM EELVKVTQVD DPLWQPSLDI 300 GLETLNFDEY RRAFARVLGP SPAGYVSEAT REVGIAIINS VDLVNSLMNE VRWSEMFPCV 360 VARASTMEII SSGMGGTRSG SIQLMRAELQ VLSPLVPIRE VTFLRFCKQH ADGLWVIVDV 420 SVDGVLRPDS GTGAGPAGYM GCRLLPSGCI VEDMQNGYAK VTWVVHAEYD EAAVHELYRP 480 LLRSGQALGA RRWLASLQRQ CEYHAILCSN PHPNHGDRHE PISPAGRRCM LRLAQRMADN 540 FCAGVCATAA QKWRRLDEWR VEGAGGRDPA GGEDKVRMMA RQSVGAPGEP PGVVLSATTS 600 VRLPGTPPQR VFDYLRDEQR RGEWDILANG EAMQEMDHIA KGQHHGNAVS LLRPNATSGN 660 QNNMLILQET CTDASGSLVV YAPVDVQSMH VVMGGGDSAY VSLLPSGFAI LPDGHTAGSS 720 NNSPGSLVTV AFQILVNNLP TAKLTVESVD TVSNLLSCTI QKIKSALQAS IISP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 62 | 67 | RKKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG046620.5 |