PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG046300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 25741.5 Da PI: 6.3426 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.7 | 2.6e-17 | 47 | 99 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr++ ++grWv+e+r+p ++g r +lg++ tae Aa+a++aa+++l+g TRIDC5AG046300.1 47 PVFHGVRRRGSNGRWVCEVRVPGKRG--ERLWLGTHVTAEAAARAHDAAMLALYG 99 5799*****************95544..************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MDTGPERNWN SPASPPSSLE QGMPTSPASP TPKRPAGRTK FKETRHPVFH GVRRRGSNGR 60 WVCEVRVPGK RGERLWLGTH VTAEAAARAH DAAMLALYGR TPAARLNYPD SAWLLAVPSS 120 LSDLADVRRA AIGAVVDFLR RQEAGASAGA VAEEAHVDGI ASAASAPDNA SSSAAAAHSQ 180 PPCANAGYEV PDALCHDMFE LHTSGEMDAG TYYADLAQGL LLEPPPPPSS GASSEHGDDA 240 ALWNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 4e-25 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG046300.1 |