PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG046170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 24154.7 Da PI: 5.1612 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.9 | 1.9e-16 | 39 | 93 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ + g+Wv+e+r+p g ++ r++lg+f +a++Aa+a++ a+++l g TRIDC5AG046170.1 39 PVYRGVRRRGREGQWVCELRVPA--GsRSySRIWLGTFASAQMAARAHDSAALALSG 93 68*******************84..55456***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
FDGQEYRTVW PEEQEYRTVW SEPPKRRAGR NKLQETRHPV YRGVRRRGRE GQWVCELRVP 60 AGSRSYSRIW LGTFASAQMA ARAHDSAALA LSGRDACLNF ADSAWRMMPV HAAGSFKLAA 120 AQEIKDAVAV ALKEFQEQQR PADESTAPSS TAEESALSII PSDLSGLDNE HWIGGMEAGS 180 YYASLAQGML MEPPADGAWR EDREHDDGFD TSLWSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 1e-25 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG046170.1 |