PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG045800.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 1068aa MW: 119116 Da PI: 4.897

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG045800.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43	1.1e-13	17	62	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l TRIDC5AG045800.3 17 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 62 78***************************.**********986 PP
2	Myb_DNA-binding	32.7	1.8e-10	69	112	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l TRIDC5AG045800.3 69 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 112 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1068 aa Download sequence
PRGSKGAGKM RIMIKGGVWK NTEDEILKAA VMKYGKNQWA RISSLLVRKS AKQCKARWYE 60 WLDPSIKKTE WTREEDEKLL HLAKLMPTQW RTIAPIVGRT PSQCLERYEK LLDAACAKDE 120 NYEPNDDPRK LRPGEIDPNP ESKPARPDPV DMDEDEKEML SEARARLANT RGKKAKRKAR 180 EKQLEEARRL ASLQKRRELK AAGIDNRHKK RKRKGIDYNA EIPFEKRPPP GFYDTVGEDR 240 PLEHVQFPTT IEELEGRRRV DVEAQLRKQD IAKNKILQRQ DAPAAIMQAN KLNDPEAVTR 300 RSKLMLPPPQ ISDHELEEIA KMGNAGDPAL AEELGEGSTA TRTLLANYSQ TPRLGMTPLR 360 TPQRTPGGKG DAIMMEAENL ARLRESQTPL LGGDNPELHP SDFSGVTPRK KEIQTPNPMA 420 TPLASPGPGV TPRIGLTPSR DGNSFGLTPK GTPFRDELHI NEEVEMQDSA QLELRRQAEL 480 RRGLRSGFAS IPQPKNEYQI VMPSITEEKE EAEERIEEDM SDRLARERAE EQARQEALLR 540 KRSKVLQRSL PRPPAASVEI LRQSLIKGGE SRSTFVPPTS LEQADELINE ELLRLLEHDN 600 AKYPLDEQTQ REKKKGSKRQ TNGPAFVPEI EGFDEHELKE ASSMVEEEIQ YLRVAMGHEN 660 ESFEDFVKSH DACQEDLMFF PANNSYGLAS VAGNADKISA LQHEFEMVKK RMDDEAKKAS 720 RLEQKIKLLT QGYQARAAKL GSQIQDTFKQ MNTAATELEC FQELQKQEQM AGAYRVRNLS 780 EEVNKQKALE QTLQSRYGDL LSGYQSIHEQ LEEHKRLLKL REEAIEAEKR AKEEAIEAEN 840 RAKEAALEAE NRAKEEAIEA ENRAKEALEA ETRAKEEEAA ARNRAAEEEN ERKNHDIEEE 900 SGKMTTITDE EAAGSKGDQM DMDNADVAGE LVGPIPPLPD TQVDNDGASI EQSTSNAQSG 960 DTVTVNEGAI DKVNSSKLDG QDNTSCSMDI DAGSQEEGKN VLAAAATSVD VGNTPVSSDQ 1020 AVSNEGSDAV HAPVSSDQAV SNEGSDAVHA PVSLDQAAPN EESGAVPE

Sequence ? help Back to Top

Protein Sequence Length: 1068 aa Download sequence

PRGSKGAGKM RIMIKGGVWK NTEDEILKAA VMKYGKNQWA RISSLLVRKS AKQCKARWYE  60
WLDPSIKKTE WTREEDEKLL HLAKLMPTQW RTIAPIVGRT PSQCLERYEK LLDAACAKDE  120
NYEPNDDPRK LRPGEIDPNP ESKPARPDPV DMDEDEKEML SEARARLANT RGKKAKRKAR  180
EKQLEEARRL ASLQKRRELK AAGIDNRHKK RKRKGIDYNA EIPFEKRPPP GFYDTVGEDR  240
PLEHVQFPTT IEELEGRRRV DVEAQLRKQD IAKNKILQRQ DAPAAIMQAN KLNDPEAVTR  300
RSKLMLPPPQ ISDHELEEIA KMGNAGDPAL AEELGEGSTA TRTLLANYSQ TPRLGMTPLR  360
TPQRTPGGKG DAIMMEAENL ARLRESQTPL LGGDNPELHP SDFSGVTPRK KEIQTPNPMA  420
TPLASPGPGV TPRIGLTPSR DGNSFGLTPK GTPFRDELHI NEEVEMQDSA QLELRRQAEL  480
RRGLRSGFAS IPQPKNEYQI VMPSITEEKE EAEERIEEDM SDRLARERAE EQARQEALLR  540
KRSKVLQRSL PRPPAASVEI LRQSLIKGGE SRSTFVPPTS LEQADELINE ELLRLLEHDN  600
AKYPLDEQTQ REKKKGSKRQ TNGPAFVPEI EGFDEHELKE ASSMVEEEIQ YLRVAMGHEN  660
ESFEDFVKSH DACQEDLMFF PANNSYGLAS VAGNADKISA LQHEFEMVKK RMDDEAKKAS  720
RLEQKIKLLT QGYQARAAKL GSQIQDTFKQ MNTAATELEC FQELQKQEQM AGAYRVRNLS  780
EEVNKQKALE QTLQSRYGDL LSGYQSIHEQ LEEHKRLLKL REEAIEAEKR AKEEAIEAEN  840
RAKEAALEAE NRAKEEAIEA ENRAKEALEA ETRAKEEEAA ARNRAAEEEN ERKNHDIEEE  900
SGKMTTITDE EAAGSKGDQM DMDNADVAGE LVGPIPPLPD TQVDNDGASI EQSTSNAQSG  960
DTVTVNEGAI DKVNSSKLDG QDNTSCSMDI DAGSQEEGKN VLAAAATSVD VGNTPVSSDQ  1020
AVSNEGSDAV HAPVSSDQAV SNEGSDAVHA PVSLDQAAPN EESGAVPE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	212	KKAKRKAREKQLEEARRLASLQKRRELKAAGIDNRHKKRK
2	195	214	KRRELKAAGIDNRHKKRKRK
3	209	214	KKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG045800.3