PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG045800.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 1072aa MW: 119543 Da PI: 4.88 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.9 | 1.1e-13 | 21 | 66 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l TRIDC5AG045800.2 21 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 66 78*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 32.7 | 1.8e-10 | 73 | 116 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l TRIDC5AG045800.2 73 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 116 68*****************99.********8..**********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1072 aa Download sequence |
VQEAPRGSKG AGKMRIMIKG GVWKNTEDEI LKAAVMKYGK NQWARISSLL VRKSAKQCKA 60 RWYEWLDPSI KKTEWTREED EKLLHLAKLM PTQWRTIAPI VGRTPSQCLE RYEKLLDAAC 120 AKDENYEPND DPRKLRPGEI DPNPESKPAR PDPVDMDEDE KEMLSEARAR LANTRGKKAK 180 RKAREKQLEE ARRLASLQKR RELKAAGIDN RHKKRKRKGI DYNAEIPFEK RPPPGFYDTV 240 GEDRPLEHVQ FPTTIEELEG RRRVDVEAQL RKQDIAKNKI LQRQDAPAAI MQANKLNDPE 300 AVTRRSKLML PPPQISDHEL EEIAKMGNAG DPALAEELGE GSTATRTLLA NYSQTPRLGM 360 TPLRTPQRTP GGKGDAIMME AENLARLRES QTPLLGGDNP ELHPSDFSGV TPRKKEIQTP 420 NPMATPLASP GPGVTPRIGL TPSRDGNSFG LTPKGTPFRD ELHINEEVEM QDSAQLELRR 480 QAELRRGLRS GFASIPQPKN EYQIVMPSIT EEKEEAEERI EEDMSDRLAR ERAEEQARQE 540 ALLRKRSKVL QRSLPRPPAA SVEILRQSLI KGGESRSTFV PPTSLEQADE LINEELLRLL 600 EHDNAKYPLD EQTQREKKKG SKRQTNGPAF VPEIEGFDEH ELKEASSMVE EEIQYLRVAM 660 GHENESFEDF VKSHDACQED LMFFPANNSY GLASVAGNAD KISALQHEFE MVKKRMDDEA 720 KKASRLEQKI KLLTQGYQAR AAKLGSQIQD TFKQMNTAAT ELECFQELQK QEQMAGAYRV 780 RNLSEEVNKQ KALEQTLQSR YGDLLSGYQS IHEQLEEHKR LLKLREEAIE AEKRAKEEAI 840 EAENRAKEAA LEAENRAKEE AIEAENRAKE ALEAETRAKE EEAAARNRAA EEENERKNHD 900 IEEESGKMTT ITDEEAAGSK GDQMDMDNAD VAGELVGPIP PLPDTQVDND GASIEQSTSN 960 AQSGDTVTVN EGAIDKVNSS KLDGQDNTSC SMDIDAGSQE EGKNVLAAAA TSVDVGNTPV 1020 SSDQAVSNEG SDAVHAPVSS DQAVSNEGSD AVHAPVSLDQ AAPNEESGAV PE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 177 | 216 | KKAKRKAREKQLEEARRLASLQKRRELKAAGIDNRHKKRK |
2 | 199 | 218 | KRRELKAAGIDNRHKKRKRK |
3 | 213 | 218 | KKRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09770.1 | 0.0 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG045800.2 |