PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG045800.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 1087aa MW: 120941 Da PI: 4.8507

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG045800.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.9	1.1e-13	36	81	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l TRIDC5AG045800.1 36 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 81 78***************************.**********986 PP
2	Myb_DNA-binding	32.6	1.8e-10	88	131	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l TRIDC5AG045800.1 88 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 131 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1087 aa Download sequence
RGGSGAPEPL CGGEEVQEAP RGSKGAGKMR IMIKGGVWKN TEDEILKAAV MKYGKNQWAR 60 ISSLLVRKSA KQCKARWYEW LDPSIKKTEW TREEDEKLLH LAKLMPTQWR TIAPIVGRTP 120 SQCLERYEKL LDAACAKDEN YEPNDDPRKL RPGEIDPNPE SKPARPDPVD MDEDEKEMLS 180 EARARLANTR GKKAKRKARE KQLEEARRLA SLQKRRELKA AGIDNRHKKR KRKGIDYNAE 240 IPFEKRPPPG FYDTVGEDRP LEHVQFPTTI EELEGRRRVD VEAQLRKQDI AKNKILQRQD 300 APAAIMQANK LNDPEAVTRR SKLMLPPPQI SDHELEEIAK MGNAGDPALA EELGEGSTAT 360 RTLLANYSQT PRLGMTPLRT PQRTPGGKGD AIMMEAENLA RLRESQTPLL GGDNPELHPS 420 DFSGVTPRKK EIQTPNPMAT PLASPGPGVT PRIGLTPSRD GNSFGLTPKG TPFRDELHIN 480 EEVEMQDSAQ LELRRQAELR RGLRSGFASI PQPKNEYQIV MPSITEEKEE AEERIEEDMS 540 DRLARERAEE QARQEALLRK RSKVLQRSLP RPPAASVEIL RQSLIKGGES RSTFVPPTSL 600 EQADELINEE LLRLLEHDNA KYPLDEQTQR EKKKGSKRQT NGPAFVPEIE GFDEHELKEA 660 SSMVEEEIQY LRVAMGHENE SFEDFVKSHD ACQEDLMFFP ANNSYGLASV AGNADKISAL 720 QHEFEMVKKR MDDEAKKASR LEQKIKLLTQ GYQARAAKLG SQIQDTFKQM NTAATELECF 780 QELQKQEQMA GAYRVRNLSE EVNKQKALEQ TLQSRYGDLL SGYQSIHEQL EEHKRLLKLR 840 EEAIEAEKRA KEEAIEAENR AKEAALEAEN RAKEEAIEAE NRAKEALEAE TRAKEEEAAA 900 RNRAAEEENE RKNHDIEEES GKMTTITDEE AAGSKGDQMD MDNADVAGEL VGPIPPLPDT 960 QVDNDGASIE QSTSNAQSGD TVTVNEGAID KVNSSKLDGQ DNTSCSMDID AGSQEEGKNV 1020 LAAAATSVDV GNTPVSSDQA VSNEGSDAVH APVSSDQAVS NEGSDAVHAP VSLDQAAPNE 1080 ESGAVPE

Sequence ? help Back to Top

Protein Sequence Length: 1087 aa Download sequence

RGGSGAPEPL CGGEEVQEAP RGSKGAGKMR IMIKGGVWKN TEDEILKAAV MKYGKNQWAR  60
ISSLLVRKSA KQCKARWYEW LDPSIKKTEW TREEDEKLLH LAKLMPTQWR TIAPIVGRTP  120
SQCLERYEKL LDAACAKDEN YEPNDDPRKL RPGEIDPNPE SKPARPDPVD MDEDEKEMLS  180
EARARLANTR GKKAKRKARE KQLEEARRLA SLQKRRELKA AGIDNRHKKR KRKGIDYNAE  240
IPFEKRPPPG FYDTVGEDRP LEHVQFPTTI EELEGRRRVD VEAQLRKQDI AKNKILQRQD  300
APAAIMQANK LNDPEAVTRR SKLMLPPPQI SDHELEEIAK MGNAGDPALA EELGEGSTAT  360
RTLLANYSQT PRLGMTPLRT PQRTPGGKGD AIMMEAENLA RLRESQTPLL GGDNPELHPS  420
DFSGVTPRKK EIQTPNPMAT PLASPGPGVT PRIGLTPSRD GNSFGLTPKG TPFRDELHIN  480
EEVEMQDSAQ LELRRQAELR RGLRSGFASI PQPKNEYQIV MPSITEEKEE AEERIEEDMS  540
DRLARERAEE QARQEALLRK RSKVLQRSLP RPPAASVEIL RQSLIKGGES RSTFVPPTSL  600
EQADELINEE LLRLLEHDNA KYPLDEQTQR EKKKGSKRQT NGPAFVPEIE GFDEHELKEA  660
SSMVEEEIQY LRVAMGHENE SFEDFVKSHD ACQEDLMFFP ANNSYGLASV AGNADKISAL  720
QHEFEMVKKR MDDEAKKASR LEQKIKLLTQ GYQARAAKLG SQIQDTFKQM NTAATELECF  780
QELQKQEQMA GAYRVRNLSE EVNKQKALEQ TLQSRYGDLL SGYQSIHEQL EEHKRLLKLR  840
EEAIEAEKRA KEEAIEAENR AKEAALEAEN RAKEEAIEAE NRAKEALEAE TRAKEEEAAA  900
RNRAAEEENE RKNHDIEEES GKMTTITDEE AAGSKGDQMD MDNADVAGEL VGPIPPLPDT  960
QVDNDGASIE QSTSNAQSGD TVTVNEGAID KVNSSKLDGQ DNTSCSMDID AGSQEEGKNV  1020
LAAAATSVDV GNTPVSSDQA VSNEGSDAVH APVSSDQAVS NEGSDAVHAP VSLDQAAPNE  1080
ESGAVPE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	192	231	KKAKRKAREKQLEEARRLASLQKRRELKAAGIDNRHKKRK
2	214	233	KRRELKAAGIDNRHKKRKRK
3	228	233	KKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG045800.1