PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG043630.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 670aa    MW: 75575.4 Da    PI: 8.3307
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG043630.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.75.4e-08382426246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++WT+ E+++l+  v++ G+++W  Ia  +g+ Rt+ qc  r+q 
  TRIDC5AG043630.7 382 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 426
                       68*****************************99**********96 PP
2Myb_DNA-binding45.61.6e-14435479248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        +WT+eEd++lv av+ +G + W ++++ +  gR ++qc +rw+k l
  TRIDC5AG043630.7 435 RAWTKEEDLQLVAAVQTFGCN-WQLVSASLV-GRIGNQCSNRWRKTL 479
                       68*****************88.*********.************975 PP
3Myb_DNA-binding43.67e-14487532248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       grW+++Ed++l+  vk + +g+W++Ia+ ++ gRt  qc +rw+++l
  TRIDC5AG043630.7 487 GRWSEDEDKRLLVSVKFFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 532
                       8******************************.************986 PP
4Myb_DNA-binding34.35.5e-11539582246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g W +eEd +l+  v++ G+  W++Ia  m  +Rt+++c  rw  
  TRIDC5AG043630.7 539 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 582
                       79*****************88.*****99999***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    
MDFYSDDDSD PDFDESLQED LDLVRRSCIT AGADPDAAVA QASSYLAVPA ATTTTAAAAA  60
ADGSSDEGDE DLALVRSIRE NLHLNKASPS SPRPICAWPP SDAEDDDLET LRAIQRRFSH  120
YHSGTSTGPL ENMKNEASKG GDDEFIAHRP GEEDVQKKDT NANTQTGFPK AALLLVDALK  180
KNRACQKFIR RKMINIEAKI EVNKDLRDRV KCLMDYQLSC RRSFGKVLCQ KVDPRVRLIS  240
SQKQSAQSAK NKYKISALLL GPAENPHVEK YKAVLKQFPV SLQKHPWSDV EKDRLAKGIK  300
QQYQETLIKD SLKNGSGDFS AVDMAYALTN TVGNFEATPE ILRSVLPLVN WDYIAAMYLP  360
GRSGAECESR WLNHDDPRIN HNAWTACEEK RLILTVQEKG MHNWINIAVA LGTQRTPFQC  420
LARYQRSLNP HILKRAWTKE EDLQLVAAVQ TFGCNWQLVS ASLVGRIGNQ CSNRWRKTLI  480
PERKRVGRWS EDEDKRLLVS VKFFRSGSWN KIAQFVPGRT QSQCSERWRN VLDPDIDHGE  540
WRPEEDSKLL ASVHEVGPCW SKIAGAMIPH RTDNMCLRRW KRLCQDELPL IVAANQVKKS  600
IFQNNFVDRE TERPAICPSD FPSLVYSKVD RGDESTVSDQ VKKPQKRSRK SRVDNVPPND  660
PSKSSAAYNI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1641647VKKPQKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-153MYB family protein