PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG043630.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 702aa    MW: 78910.2 Da    PI: 8.5507
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG043630.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.65.7e-08397441246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++WT+ E+++l+  v++ G+++W  Ia  +g+ Rt+ qc  r+q 
  TRIDC5AG043630.6 397 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 441
                       68*****************************99**********96 PP
2Myb_DNA-binding45.51.7e-14450494248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        +WT+eEd++lv av+ +G + W ++++ +  gR ++qc +rw+k l
  TRIDC5AG043630.6 450 RAWTKEEDLQLVAAVQTFGCN-WQLVSASLV-GRIGNQCSNRWRKTL 494
                       68*****************88.*********.************975 PP
3Myb_DNA-binding43.57.4e-14502547248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       grW+++Ed++l+  vk + +g+W++Ia+ ++ gRt  qc +rw+++l
  TRIDC5AG043630.6 502 GRWSEDEDKRLLVSVKFFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 547
                       8******************************.************986 PP
4Myb_DNA-binding34.25.9e-11554597246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g W +eEd +l+  v++ G+  W++Ia  m  +Rt+++c  rw  
  TRIDC5AG043630.6 554 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 597
                       79*****************88.*****99999***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 702 aa     Download sequence    
MDFYSDDDSD PDFDESLQED LDLVRRSCIT AGADPDAAVA QASSYLAVPA ATTTTAAAAA  60
ADGSSDEGDE DLALVRSIRE NLHLNKASPS SPRPICAWPP SDAEDDDLET LRAIQRRFSH  120
YHSGESTRDP LLPASNLDAP GTSTGPLENM KNEASKGGDD EFIAHRPGEE DVQKKDTNAN  180
TQTGFPKAAL LLVDALKKNR ACQKFIRRKM INIEAKIEVN KDLRDRVKCL MDYQLSCRRS  240
FGKVLCQKVD PRVRLISSQK QSAQSNKYKI SALLLGPAEN PHVEKYKAVL KQFPVSLQKH  300
PWSDVEKDRL AKGIKQQYQE TLIKDSLKNG SGDFSAVDMA YALTNTVGNF EATPEILRSV  360
LPLVNWDYIA AMYLPGRSGA ECESRWLNHD DPRINHNAWT ACEEKRLILT VQEKGMHNWI  420
NIAVALGTQR TPFQCLARYQ RSLNPHILKR AWTKEEDLQL VAAVQTFGCN WQLVSASLVG  480
RIGNQCSNRW RKTLIPERKR VGRWSEDEDK RLLVSVKFFR SGSWNKIAQF VPGRTQSQCS  540
ERWRNVLDPD IDHGEWRPEE DSKLLASVHE VGPCWSKIAG AMIPHRTDNM CLRRWKRLCQ  600
DELPLIVAAN QVKKSIFQNN FVDRETERPA ICPSDFPSLV YSKVDRGDES TVSDQVKKPQ  660
KRSRKSRVDN VPPNDPSKSS AAAAAVNITK RKSRKKLSGY CL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1656662VKKPQKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-154MYB family protein