PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG043630.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 383aa MW: 43666.7 Da PI: 9.9387 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.7 | 2.6e-08 | 78 | 122 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WT+ E+++l+ v++ G+++W Ia +g+ Rt+ qc r+q TRIDC5AG043630.4 78 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 122 68*****************************99**********96 PP | |||||||
2 | Myb_DNA-binding | 46.6 | 7.9e-15 | 131 | 175 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd++lv av+ +G + W ++++ + gR ++qc +rw+k l TRIDC5AG043630.4 131 RAWTKEEDLQLVAAVQTFGCN-WQLVSASLV-GRIGNQCSNRWRKTL 175 68*****************88.*********.************975 PP | |||||||
3 | Myb_DNA-binding | 44.6 | 3.3e-14 | 183 | 228 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 grW+++Ed++l+ vk + +g+W++Ia+ ++ gRt qc +rw+++l TRIDC5AG043630.4 183 GRWSEDEDKRLLVSVKFFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 228 8******************************.************986 PP | |||||||
4 | Myb_DNA-binding | 35.3 | 2.6e-11 | 235 | 278 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g W +eEd +l+ v++ G+ W++Ia m +Rt+++c rw TRIDC5AG043630.4 235 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 278 79*****************88.*****99999***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence |
ETLIKDSLKN GSGDFSAVDM AYALTNTVGN FEATPEILRS VLPLVNWDYI AAMYLPGRSG 60 AECESRWLNH DDPRINHNAW TACEEKRLIL TVQEKGMHNW INIAVALGTQ RTPFQCLARY 120 QRSLNPHILK RAWTKEEDLQ LVAAVQTFGC NWQLVSASLV GRIGNQCSNR WRKTLIPERK 180 RVGRWSEDED KRLLVSVKFF RSGSWNKIAQ FVPGRTQSQC SERWRNVLDP DIDHGEWRPE 240 EDSKLLASVH EVGPCWSKIA GAMIPHRTDN MCLRRWKRLC QDELPLIVAA NQVKKSIFQN 300 NFVDRETERP AICPSDFPSL VYSKVDRGDE STVSDQVKKP QKRSRKSRVD NVPPNDPSKS 360 SAAAAAVNIT KRKSRKKLSG KWS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 337 | 343 | VKKPQKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.2 | 1e-107 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG043630.4 |