PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG043630.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 851aa    MW: 95141.5 Da    PI: 10.1118
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG043630.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.37.2e-08279323246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++WT+ E+++l+  v++ G+++W  Ia  +g+ Rt+ qc  r+q 
  TRIDC5AG043630.2 279 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 323
                       68*****************************99**********96 PP
2Myb_DNA-binding45.22.2e-14332376248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        +WT+eEd++lv av+ +G + W ++++ +  gR ++qc +rw+k l
  TRIDC5AG043630.2 332 RAWTKEEDLQLVAAVQTFGCN-WQLVSASLV-GRIGNQCSNRWRKTL 376
                       68*****************88.*********.************975 PP
3Myb_DNA-binding43.29.4e-14384429248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       grW+++Ed++l+  vk + +g+W++Ia+ ++ gRt  qc +rw+++l
  TRIDC5AG043630.2 384 GRWSEDEDKRLLVSVKFFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 429
                       8******************************.************986 PP
4Myb_DNA-binding33.97.4e-11436479246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g W +eEd +l+  v++ G+  W++Ia  m  +Rt+++c  rw  
  TRIDC5AG043630.2 436 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 479
                       79*****************88.*****99999***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 851 aa     Download sequence    
EDDDLETLRA IQRRFSHYHS GTSTGPLENM KNEASKGGDD EFIAHRPGEE DVQKKDTNAN  60
TQTGFPKAAL LLVDALKKNR ACQKFIRRKM INIEAKIEVN KDLRDRVKCL MDYQLSCRRS  120
FGKVLCQKVD PRVRLISSQK QSAQSAKNKY KISALLLGPA ENPHVEKYKA VLKQFPVSLQ  180
KHPWSDVEKD RLAKGIKQQY QETLIKDSLK NGSGDFSAVD MAYALTNTVG NFEATPEILR  240
SVLPLVNWDY IAAMYLPGRS GAECESRWLN HDDPRINHNA WTACEEKRLI LTVQEKGMHN  300
WINIAVALGT QRTPFQCLAR YQRSLNPHIL KRAWTKEEDL QLVAAVQTFG CNWQLVSASL  360
VGRIGNQCSN RWRKTLIPER KRVGRWSEDE DKRLLVSVKF FRSGSWNKIA QFVPGRTQSQ  420
CSERWRNVLD PDIDHGEWRP EEDSKLLASV HEVGPCWSKI AGAMIPHRTD NMCLRRWKRL  480
CQDELPLIVA ANQVKKSIFQ NNFVDRETER PAICPSDFPS LVYSKVDRGD ESTVSDQVKK  540
PQKRSRKSRV DNVPPNDPSK SSAAAAAVNI TKRKSRKKLS GSGAENQTGE DVTVSDGVNN  600
SSRGHSKARK RKVTTDGDVV VQKRMRGSIS VDNELTLDMF GGPISFNNEA LTNQKRDPTS  660
VGKEGTAKKR TRGTVSVGNE GAVKKKMRGS ISVGEGRAVK NRMRGSVSID NQGNTTKRKR  720
VSRKSAKGNS TTDGGVNACE LDLPSMPSET SAERHIDTGN TNKMNRKSTP RPKQINMAEG  780
TVDEYSRLAD CISFARGNGA SKNNSAMPLN NAIQSDGPSG ENLQVAISAR LDPTYVEQLT  840
EDSSCQLDDN H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1538544VKKPQKR
2667673AKKRTRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-148MYB family protein