PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG043630.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 858aa    MW: 95866.2 Da    PI: 10.0796
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG043630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.37.3e-08286330246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++WT+ E+++l+  v++ G+++W  Ia  +g+ Rt+ qc  r+q 
  TRIDC5AG043630.1 286 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 330
                       68*****************************99**********96 PP
2Myb_DNA-binding45.22.2e-14339383248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        +WT+eEd++lv av+ +G + W ++++ +  gR ++qc +rw+k l
  TRIDC5AG043630.1 339 RAWTKEEDLQLVAAVQTFGCN-WQLVSASLV-GRIGNQCSNRWRKTL 383
                       68*****************88.*********.************975 PP
3Myb_DNA-binding43.19.5e-14391436248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       grW+++Ed++l+  vk + +g+W++Ia+ ++ gRt  qc +rw+++l
  TRIDC5AG043630.1 391 GRWSEDEDKRLLVSVKFFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 436
                       8******************************.************986 PP
4Myb_DNA-binding33.97.5e-11443486246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g W +eEd +l+  v++ G+  W++Ia  m  +Rt+++c  rw  
  TRIDC5AG043630.1 443 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 486
                       79*****************88.*****99999***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 858 aa     Download sequence    
AWPPSDAEDD DLETLRAIQR RFSHYHSGTS TGPLENMKNE ASKGGDDEFI AHRPGEEDVQ  60
KKDTNANTQT GFPKAALLLV DALKKNRACQ KFIRRKMINI EAKIEVNKDL RDRVKCLMDY  120
QLSCRRSFGK VLCQKVDPRV RLISSQKQSA QSAKNKYKIS ALLLGPAENP HVEKYKAVLK  180
QFPVSLQKHP WSDVEKDRLA KGIKQQYQET LIKDSLKNGS GDFSAVDMAY ALTNTVGNFE  240
ATPEILRSVL PLVNWDYIAA MYLPGRSGAE CESRWLNHDD PRINHNAWTA CEEKRLILTV  300
QEKGMHNWIN IAVALGTQRT PFQCLARYQR SLNPHILKRA WTKEEDLQLV AAVQTFGCNW  360
QLVSASLVGR IGNQCSNRWR KTLIPERKRV GRWSEDEDKR LLVSVKFFRS GSWNKIAQFV  420
PGRTQSQCSE RWRNVLDPDI DHGEWRPEED SKLLASVHEV GPCWSKIAGA MIPHRTDNMC  480
LRRWKRLCQD ELPLIVAANQ VKKSIFQNNF VDRETERPAI CPSDFPSLVY SKVDRGDEST  540
VSDQVKKPQK RSRKSRVDNV PPNDPSKSSA AAAAVNITKR KSRKKLSGSG AENQTGEDVT  600
VSDGVNNSSR GHSKARKRKV TTDGDVVVQK RMRGSISVDN ELTLDMFGGP ISFNNEALTN  660
QKRDPTSVGK EGTAKKRTRG TVSVGNEGAV KKKMRGSISV GEGRAVKNRM RGSVSIDNQG  720
NTTKRKRVSR KSAKGNSTTD GGVNACELDL PSMPSETSAE RHIDTGNTNK MNRKSTPRPK  780
QINMAEGTVD EYSRLADCIS FARGNGASKN NSAMPLNNAI QSDGPSGENL QVAISARLDP  840
TYVEQLTEDS SCQLDDNH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1545551VKKPQKR
2674680AKKRTRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-149MYB family protein