PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG042970.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 74aa MW: 8900.46 Da PI: 11.6612 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 51 | 3.8e-16 | 12 | 43 | 47 | 78 |
SSEEETTT--SS--S-STTTT-------S--- CS SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkqa 78 +rfh l efDe+krsCr+rL++hn+rrrk+q TRIDC5AG042970.4 12 ARFHLLAEFDEAKRSCRKRLDGHNRRRRKPQV 43 7****************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 74 aa Download sequence |
MFVFLTINLC FARFHLLAEF DEAKRSCRKR LDGHNRRRRK PQVDSMTSGS FMTRQQGIFL 60 IYNRFFLSAC RLLH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 24 | 41 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 3e-16 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG042970.4 |