PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG042970.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 279aa    MW: 30112.4 Da    PI: 6.9335
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG042970.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP47.74.2e-1512434778
                      SSEEETTT--SS--S-STTTT-------S--- CS
               SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkqa 78
                      +rfh l efDe+krsCr+rL++hn+rrrk+q 
  TRIDC5AG042970.3 12 ARFHLLAEFDEAKRSCRKRLDGHNRRRRKPQV 43
                      7****************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MFVFLTINLC FARFHLLAEF DEAKRSCRKR LDGHNRRRRK PQVDSMTSGS FMTRQQGLYS  60
NAGTRFASFS APRPESSWSG IIKSEDSNPY YTTTHQINFA GSSSSYSKEG RRFPFLHEGD  120
QMSFSTGAAA LEIPPVCQPL LKAVAPPPPP ESSSSNKMFS DGQLTHMLDS DCALSLLSSP  180
ANSSSVDVSR MVRPSEHIPS VPNLQQFGSS SWFACSQASS AATGFAAFAG GMDGEQQLNA  240
GGALVPSSND NEMNCHGIFH VGADGSSEGT SPSLPFSWQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12441KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76580.16e-14SBP family protein