PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG042970.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 279aa MW: 30112.4 Da PI: 6.9335 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 47.7 | 4.2e-15 | 12 | 43 | 47 | 78 |
SSEEETTT--SS--S-STTTT-------S--- CS SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkqa 78 +rfh l efDe+krsCr+rL++hn+rrrk+q TRIDC5AG042970.3 12 ARFHLLAEFDEAKRSCRKRLDGHNRRRRKPQV 43 7****************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MFVFLTINLC FARFHLLAEF DEAKRSCRKR LDGHNRRRRK PQVDSMTSGS FMTRQQGLYS 60 NAGTRFASFS APRPESSWSG IIKSEDSNPY YTTTHQINFA GSSSSYSKEG RRFPFLHEGD 120 QMSFSTGAAA LEIPPVCQPL LKAVAPPPPP ESSSSNKMFS DGQLTHMLDS DCALSLLSSP 180 ANSSSVDVSR MVRPSEHIPS VPNLQQFGSS SWFACSQASS AATGFAAFAG GMDGEQQLNA 240 GGALVPSSND NEMNCHGIFH VGADGSSEGT SPSLPFSWQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 24 | 41 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76580.1 | 6e-14 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG042970.3 |